RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 MCM2P49736 904 aa15.57■□□□□ 0.08
CHRNB4-204ENST00000559849 NPY5RQ15761 445 aa15.57■□□□□ 0.08
CHRNB4-204ENST00000559849 DOCK5Q9H7D0 1870 aa15.57■□□□□ 0.08
CHRNB4-204ENST00000559849 FAM86B1E9PN63 330 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 CLTBP09497 229 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 FAM86B2P0C5J1 330 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 USP11P51784 963 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 FAAP100Q0VG06 881 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 TLR3O15455 904 aaKnown RBP15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 NBPF20Q3BBV1 942 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 PRDM5Q9NQX1 630 aaPredicted RBP15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 PDLIM7Q9NR12 457 aa15.56■□□□□ 0.08
CHRNB4-204ENST00000559849 ARP10275 920 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 CIITAP33076 1130 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 TRIM29Q14134 588 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 NFRKBQ6P4R8 1299 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 PLA2G4DQ86XP0 818 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 FAM126BQ8IXS8 530 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 TBCKQ8TEA7 893 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 KAT2BQ92831 832 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 GPR20Q99678 358 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 KATNAL1Q9BW62 490 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 TMEM39AQ9NV64 488 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 IGLV3-22A0A075B6J6 115 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 HMGN5P82970 282 aaKnown RBP15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 KRT25Q7Z3Z0 450 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 SDF4Q9BRK5 362 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 BRMS1Q9HCU9 246 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 PKD2L1Q9P0L9 805 aa15.55■□□□□ 0.08
CHRNB4-204ENST00000559849 F2P00734 622 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 CD4P01730 458 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 CHMP4BP1P59074 171 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 SETQ01105 290 aaPredicted RBP15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 SP4Q02446 784 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 NONOQ15233 471 aaKnown RBP eCLIP15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 SH3RF1Q7Z6J0 888 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 TMX3Q96JJ7 454 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 NFASCO94856 1347 aa15.54■□□□□ 0.08
CHRNB4-204ENST00000559849 CCDC194A0A1B0GVG4 234 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 TRIM43BA6NCK2 446 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 KIAA0355O15063 1070 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 CD2BP2O95400 341 aaKnown RBP15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 SUPT20HL2P0C7V6 817 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 ZNF286BP0CG31 522 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 FAM47CQ5HY64 1035 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 SEPT1Q8WYJ6 367 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 TRIM43Q96BQ3 446 aaPredicted RBP15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 LBHD1Q9BQE6 289 aaPredicted RBP15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 C16orf70Q9BSU1 422 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 JPH1Q9HDC5 661 aaPredicted RBP15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 SLC9A2Q9UBY0 812 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 H3BRB1 525 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 HAS3O00219 553 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 EDIL3O43854 480 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 MMP1P03956 469 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 KRT2P35908 639 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 PSEN2P49810 448 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 KIAA0753Q2KHM9 967 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 PRR16Q569H4 304 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 GDF15Q99988 308 aa15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 TUT1Q9H6E5 874 aaKnown RBP15.53■□□□□ 0.08
CHRNB4-204ENST00000559849 TRIOBPQ9H2D6 2365 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 IPO5O00410 1097 aaKnown RBP15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 B4GALT4O60513 344 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 LGALS2P05162 132 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 RAG1P15918 1043 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 TCF7P36402 384 aaPredicted RBP15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 ITGB3BPQ13352 177 aaPredicted RBP15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 MFSD10Q14728 455 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 KRT40Q6A162 431 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 SESTD1Q86VW0 696 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 C7orf31Q8N865 590 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 FAM184AQ8NB25 1140 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 OXER1Q8TDS5 423 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 ZNF577Q9BSK1 485 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 TRPV6Q9H1D0 765 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 TBC1D22BQ9NU19 505 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 TBX21Q9UL17 535 aa15.52■□□□□ 0.08
CHRNB4-204ENST00000559849 CYP3A7-CYP3A51PA0A087WV96 503 aa15.52■□□□□ 0.07
CHRNB4-204ENST00000559849 CYP3A7P24462 503 aa15.52■□□□□ 0.07
CHRNB4-204ENST00000559849 MAGEA10P43363 369 aaPredicted RBP15.52■□□□□ 0.07
CHRNB4-204ENST00000559849 TELO2Q9Y4R8 837 aa15.52■□□□□ 0.07
CHRNB4-204ENST00000559849 GSTTP1A0A1W2PQM5 241 aa15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 BMP8BP34820 402 aa15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 MDM2Q00987 491 aaPredicted RBP15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 INF2Q27J81 1249 aa15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 MOXD1Q6UVY6 613 aa15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 LENG9Q96B70 501 aa15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 C8orf76Q96K31 380 aa15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 TRMT13Q9NUP7 481 aaKnown RBP15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 ZNF215Q9UL58 517 aaPredicted RBP15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 COLQQ9Y215 455 aaPredicted RBP15.51■□□□□ 0.07
CHRNB4-204ENST00000559849 BTBD18B2RXH4 712 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 DHX15O43143 795 aaKnown RBP15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 TIMP1P01033 207 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 NR5A1Q13285 461 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms