RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PFKFB1P16118 471 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 KCNA2P16389 499 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 LIG1P18858 919 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 CDC25AP30304 524 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 ICAM3P32942 547 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 TXLNAP40222 546 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 UBA7P41226 1012 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 SP4Q02446 784 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 ARHGEF6Q15052 776 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 OLFML2BQ68BL8 750 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
TPM1-221ENST00000559831 GPT2Q8TD30 523 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 AK8Q96MA6 479 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 RIT2Q99578 217 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 UNC45AQ9H3U1 944 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 PDGFCQ9NRA1 345 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 SRRDQ9UH36 339 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 VAV3Q9UKW4 847 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 ARIH2O95376 493 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 MBD3O95983 291 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 UBA1P22314 1058 aaKnown RBP11.74□□□□□ -0.53
TPM1-221ENST00000559831 CYP2C19P33261 490 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 NDUFA8P51970 172 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 SP2Q02086 613 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 PDIA5Q14554 519 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 TTLL4Q14679 1199 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 LY6KQ17RY6 165 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 PRAMEF19Q5SWL8 479 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 KCNV1Q6PIU1 500 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 OTOP1Q7RTM1 612 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 CABP7Q86V35 215 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 PDILTQ8N807 584 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 SCFD2Q8WU76 684 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 PLIN2Q99541 437 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 PANK2Q9BZ23 570 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 ABHD16BQ9H3Z7 469 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 NFASCO94856 1347 aa11.74□□□□□ -0.53
TPM1-221ENST00000559831 EML1O00423 815 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 DHX15O43143 795 aaKnown RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 TRAK2O60296 914 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 GGPS1O95749 300 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 GNRH1P01148 92 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 TXNP10599 105 aaKnown RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 XRCC5P13010 732 aaKnown RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 CCT6AP40227 531 aaKnown RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 ADCYAP1R1P41586 468 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 SYKP43405 635 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 SPIRE1Q08AE8 756 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 PPP2R5CQ13362 524 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 NEDD9Q14511 834 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 KARSQ15046 597 aaKnown RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 TAPT1Q6NXT6 567 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 CYFIP1Q7L576 1253 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 RAET1EQ8TD07 263 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 TRIB2Q92519 343 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 CDK5RAP3Q96JB5 506 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 KATNBL1Q9H079 304 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 BCAS3Q9H6U6 928 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 SLC9A2Q9UBY0 812 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 CCDC39Q9UFE4 941 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 DDX41Q9UJV9 622 aaKnown RBP11.73□□□□□ -0.53
TPM1-221ENST00000559831 KCNH3Q9ULD8 1083 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 SAMM50Q9Y512 469 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 TRIM17Q9Y577 477 aa11.73□□□□□ -0.53
TPM1-221ENST00000559831 LOXHD1Q8IVV2 1947 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 POLR2DO15514 142 aaKnown RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 ADCY3O60266 1144 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 NR1I2O75469 434 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 CCNE2O96020 404 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 TGFB3P10600 412 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 ELNP15502 786 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 KRT76Q01546 638 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 TMEM63BQ5T3F8 832 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 GIMAP8Q8ND71 665 aaPredicted RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 COPS5Q92905 334 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 DHX58Q96C10 678 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 CALML4Q96GE6 196 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 EIF2AK1Q9BQI3 630 aaKnown RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 MMTAG2Q9BU76 263 aaKnown RBP11.72□□□□□ -0.53
TPM1-221ENST00000559831 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 MLXIPQ9HAP2 919 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 HPSEQ9Y251 543 aa11.72□□□□□ -0.53
TPM1-221ENST00000559831 KDM3AQ9Y4C1 1321 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms