RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 TRIM50Q86XT4 487 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 MTA3Q9BTC8 594 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 MYO7AQ13402 2215 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 PIK3CDO00329 1044 aa21.71■■□□□ 1.07
CDC42BPB-206ENST00000559790 ATXN2LQ8WWM7 1075 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-206ENST00000559790 ASB2Q96Q27 587 aa21.71■■□□□ 1.07
CDC42BPB-206ENST00000559790 SMARCA1P28370 1054 aa21.7■■□□□ 1.06
CDC42BPB-206ENST00000559790 ADAM17P78536 824 aa21.7■■□□□ 1.06
CDC42BPB-206ENST00000559790 CREB3L3Q68CJ9 461 aa21.7■■□□□ 1.06
CDC42BPB-206ENST00000559790 RAB11FIP4Q86YS3 637 aa21.7■■□□□ 1.06
CDC42BPB-206ENST00000559790 GPR20Q99678 358 aa21.7■■□□□ 1.06
CDC42BPB-206ENST00000559790 SMIM10L2AP0DMW4 78 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 SMIM10L2BP0DMW5 78 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 TRAF1Q13077 416 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 PCNX4Q63HM2 1172 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 METTL7BQ6UX53 244 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 LRRC2Q9BYS8 371 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 RTEL1Q9NZ71 1219 aa21.69■■□□□ 1.06
CDC42BPB-206ENST00000559790 TTC3P53804 2025 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 hCG_1642624A0A1W2PR95 340 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 H3BRB1 525 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 TREHO43280 583 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 FIBPO43427 364 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 TFF2Q03403 129 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 CYFIP1Q7L576 1253 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 CTCFLQ8NI51 663 aaPredicted RBP21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 TUT1Q9H6E5 874 aaKnown RBP21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 EVPLQ92817 2033 aa21.68■■□□□ 1.06
CDC42BPB-206ENST00000559790 CNTNAP5Q8WYK1 1306 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 STAM2O75886 525 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 GJB5O95377 273 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 PARNO95453 639 aaKnown RBP21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 MCM5P33992 734 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 LIFRP42702 1097 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 GRB10Q13322 594 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 ARNTL2Q8WYA1 636 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 SYMPKQ92797 1274 aaKnown RBP21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 RRP36Q96EU6 259 aaKnown RBP21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 TMEM87BQ96K49 555 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 MLXIPQ9HAP2 919 aa21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 MYH9P35579 1960 aaKnown RBP21.67■■□□□ 1.06
CDC42BPB-206ENST00000559790 ABHD14A-ACY1A0A1B0GW23 586 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 TLL1O43897 1013 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 ATP9AO75110 1047 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 LGR5O75473 907 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 KCNA2P16389 499 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 ITGB5P18084 799 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 KIF5BP33176 963 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 KCNJ6P48051 423 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 FUT2Q10981 343 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 TYW1BQ6NUM6 668 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 SGMS1Q86VZ5 419 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 MICALL1Q8N3F8 863 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 ADAMTS19Q8TE59 1207 aa21.66■■□□□ 1.06
CDC42BPB-206ENST00000559790 LINC01553A4QN01 128 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 UBE2SQ16763 222 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 GNPTABQ3T906 1256 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 PLEKHG4Q58EX7 1191 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 CASC1Q6TDU7 716 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 DBF4BQ8NFT6 615 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 GDPD5Q8WTR4 605 aa21.65■■□□□ 1.06
CDC42BPB-206ENST00000559790 C17orf102A2RUQ5 167 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 BMP1P13497 986 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 MRPS5P82675 430 aaKnown RBP21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 NEDD9Q14511 834 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 BMP2KLQ5H9B9 411 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 SMARCC2Q8TAQ2 1214 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 LMBR1Q8WVP7 490 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 ATP6V0A1Q93050 837 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 NECAB3Q96P71 396 aaPredicted RBP21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 SENP7Q9BQF6 1050 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 SETD4Q9NVD3 440 aa21.64■■□□□ 1.05
CDC42BPB-206ENST00000559790 THPOP40225 353 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 KCNQ1P51787 676 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 HTRA4P83105 476 aaPredicted RBP21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 XRRA1Q6P2D8 792 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 APOA5Q6Q788 366 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 RASEFQ8IZ41 740 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 SP7Q8TDD2 431 aaPredicted RBP21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 TCEANC2Q96MN5 208 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 LZTS2Q9BRK4 669 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 UBIAD1Q9Y5Z9 338 aa21.63■■□□□ 1.05
CDC42BPB-206ENST00000559790 EMSYQ7Z589 1322 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 RSPH10B2B2RC85 870 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 TNFRSF10AO00220 468 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 RSPH10BP0C881 870 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 ERVK-21P61565 698 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 EXOSC10Q01780 885 aaKnown RBP21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 ADCK5Q3MIX3 580 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 MICU3Q86XE3 530 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 GPRASP2Q96D09 838 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 USP26Q9BXU7 913 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 SUGCTQ9HAC7 445 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 ANO2Q9NQ90 1003 aa21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 SEC63Q9UGP8 760 aaKnown RBP21.62■■□□□ 1.05
CDC42BPB-206ENST00000559790 BRPF3Q9ULD4 1205 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms