RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ARVCFO00192 962 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 PLA2G6O60733 806 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 NEFLP07196 543 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 C6orf222P0C671 652 aaPredicted RBP6.88□□□□□ -1.31
USP3-215ENST00000559771 TSPY3P0CV98 308 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 TSPY8P0CW00 308 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 CSF2RAP15509 400 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 MCCP23508 829 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 BEX3Q00994 111 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 LRP8Q14114 963 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 TMEM240Q5SV17 173 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 MFSD5Q6N075 450 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 ANKRD35Q8N283 1001 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 STAG1Q8WVM7 1258 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 ACAD9Q9H845 621 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 HOMER2Q9NSB8 354 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 RNF146Q9NTX7 359 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 ANAPC4Q9UJX5 808 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 TRANK1O15050 2925 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 A0A0U1RQG5 324 aaPredicted RBP6.87□□□□□ -1.31
USP3-215ENST00000559771 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.87□□□□□ -1.31
USP3-215ENST00000559771 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.87□□□□□ -1.31
USP3-215ENST00000559771 CFAP99D6REC4 459 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 ACRP10323 421 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 FOSL2P15408 326 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 MX1P20591 662 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 CYP2C18P33260 490 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 SLC1A4P43007 532 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 STAT2P52630 851 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 PDE4BQ07343 736 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 GNASQ5JWF2 1037 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 FAM160B2Q86V87 743 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 PCSK9Q8NBP7 692 aaKnown RBP6.87□□□□□ -1.31
USP3-215ENST00000559771 GPATCH3Q96I76 525 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 GLT1D1Q96MS3 346 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 FSD1Q9BTV5 496 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 PBX4Q9BYU1 374 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 NAPBQ9H115 298 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 PRDM6Q9NQX0 595 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 CYP39A1Q9NYL5 469 aa6.87□□□□□ -1.31
USP3-215ENST00000559771 CXXC1Q9P0U4 656 aaPredicted RBP6.87□□□□□ -1.31
USP3-215ENST00000559771 MROH7Q68CQ1 1323 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 A0A0D9SFI3 127 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 RBAK-RBAKDNI3L0D1 243 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 NFIBO00712 420 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 ORC4O43929 436 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 THBS1P07996 1170 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 ALAS1P13196 640 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 MAP2K3P46734 347 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 PSMC6P62333 389 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 TNFAIP2Q03169 654 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 FZD5Q13467 585 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 LAMC2Q13753 1193 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 ADGRE1Q14246 886 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 ALX1Q15699 326 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 FSCN1Q16658 493 aaKnown RBP6.86□□□□□ -1.31
USP3-215ENST00000559771 TKFCQ3LXA3 575 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 BTNL9Q6UXG8 535 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 RIPOR1Q6ZS17 1223 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 ZNF365Q70YC5 407 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 TLK2Q86UE8 772 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 FBXO16Q8IX29 292 aaPredicted RBP6.86□□□□□ -1.31
USP3-215ENST00000559771 CHURC1Q8WUH1 139 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 SPIRE2Q8WWL2 714 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 CLEC4DQ8WXI8 215 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 NACAP1Q9BZK3 213 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 TRPV6Q9H1D0 765 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 WNT8AQ9H1J5 351 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 RANBP17Q9H2T7 1088 aaKnown RBP6.86□□□□□ -1.31
USP3-215ENST00000559771 STX8Q9UNK0 236 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
USP3-215ENST00000559771 RBM47A0AV96 593 aaKnown RBP6.85□□□□□ -1.31
USP3-215ENST00000559771 ASB14A6NK59 587 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 ERC2O15083 957 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 DYNC1LI2O43237 492 aaPredicted RBP6.85□□□□□ -1.31
USP3-215ENST00000559771 B4GALT4O60513 344 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 FGAP02671 866 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 ICAM1P05362 532 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 SLC16A2P36021 539 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 DGKGP49619 791 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 PDE1AP54750 535 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 PPIGQ13427 754 aaKnown RBP eCLIP6.85□□□□□ -1.313e-6■■■□□ 16.9
USP3-215ENST00000559771 ITGA7Q13683 1181 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms