RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 GABREP78334 506 aa5□□□□□ -1.61
CASC4-210ENST00000559550 ZC3H12BQ5HYM0 836 aaKnown RBP5□□□□□ -1.61
CASC4-210ENST00000559550 DCP2Q8IU60 420 aaKnown RBP5□□□□□ -1.61
CASC4-210ENST00000559550 IFNL3Q8IZI9 196 aa5□□□□□ -1.61
CASC4-210ENST00000559550 Q8N1X5 172 aa5□□□□□ -1.61
CASC4-210ENST00000559550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5□□□□□ -1.61
CASC4-210ENST00000559550 SLC52A2Q9HAB3 445 aa5□□□□□ -1.61
CASC4-210ENST00000559550 NUDT5Q9UKK9 219 aa5□□□□□ -1.61
CASC4-210ENST00000559550 COA3Q9Y2R0 106 aaPredicted RBP5□□□□□ -1.61
CASC4-210ENST00000559550 PCDHA8Q9Y5H6 950 aa5□□□□□ -1.61
CASC4-210ENST00000559550 IGSF3O75054 1194 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 ITGB3P05106 788 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 COL6A2P12110 1019 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 MC3RP41968 323 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 RANGAP1P46060 587 aaPredicted RBP4.99□□□□□ -1.61
CASC4-210ENST00000559550 SLC6A11P48066 632 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 SLC9A5Q14940 896 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 KIZQ2M2Z5 673 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 STEAP3Q658P3 488 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 MAMDC2Q7Z304 686 aaPredicted RBP4.99□□□□□ -1.61
CASC4-210ENST00000559550 MILR1Q7Z6M3 343 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 JAZF1Q86VZ6 243 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 SLC7A14Q8TBB6 771 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 PIP4K2CQ8TBX8 421 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 ALG3Q92685 438 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 KCNJ15Q99712 375 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 AP5M1Q9H0R1 490 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 EPB41L1Q9H4G0 881 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 IPPKQ9H8X2 491 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 SMPD4Q9NXE4 827 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 NDOR1Q9UHB4 597 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 PCDHA9Q9Y5H5 950 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 DUSP10Q9Y6W6 482 aa4.99□□□□□ -1.61
CASC4-210ENST00000559550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.98□□□□□ -1.61
CASC4-210ENST00000559550 ESYT3A0FGR9 886 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 PPP1R12AO14974 1030 aaPredicted RBP4.98□□□□□ -1.61
CASC4-210ENST00000559550 DGKIO75912 1065 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 RASGRP1O95267 797 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 ZBTB7AO95365 584 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 CRTAMO95727 393 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 SOD2P04179 222 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 LIMS1P48059 325 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 GUCY1A3Q02108 690 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 TRIM61Q5EBN2 209 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 CPZQ66K79 652 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 GSTCDQ8NEC7 633 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 PCDH19Q8TAB3 1148 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 SEC14L1Q92503 715 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 SCLYQ96I15 445 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 CLUHP3Q96NS8 147 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 SYT3Q9BQG1 590 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 ALG1Q9BT22 464 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 MRIQ9BWK5 157 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 SLITRK6Q9H5Y7 841 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 NCOA5Q9HCD5 579 aaKnown RBP4.98□□□□□ -1.61
CASC4-210ENST00000559550 TMEM260Q9NX78 707 aa4.98□□□□□ -1.61
CASC4-210ENST00000559550 MRPL42Q9Y6G3 142 aaKnown RBP4.98□□□□□ -1.61
CASC4-210ENST00000559550 ARVCFO00192 962 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 AQP7O14520 342 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 HGSO14964 777 aaPredicted RBP4.97□□□□□ -1.61
CASC4-210ENST00000559550 NKRFO15226 690 aaKnown RBP eCLIP4.97□□□□□ -1.61
CASC4-210ENST00000559550 TADA3O75528 432 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 RAPGEF3O95398 923 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 ACVRL1P37023 503 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 RBM10P98175 930 aaKnown RBP4.97□□□□□ -1.61
CASC4-210ENST00000559550 PAK1Q13153 545 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 EMC4Q5J8M3 183 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 HABP4Q5JVS0 413 aaKnown RBP4.97□□□□□ -1.61
CASC4-210ENST00000559550 NT5DC1Q5TFE4 455 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 BRAPQ7Z569 592 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 FGD2Q7Z6J4 655 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 MTDHQ86UE4 582 aaKnown RBP4.97□□□□□ -1.61
CASC4-210ENST00000559550 RBM12BQ8IXT5 1001 aaKnown RBP4.97□□□□□ -1.61
CASC4-210ENST00000559550 ADGRG2Q8IZP9 1017 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 FAM26EQ8N5C1 309 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 ARRDC4Q8NCT1 418 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 MRPL4Q9BYD3 311 aaKnown RBP4.97□□□□□ -1.61
CASC4-210ENST00000559550 TRIM39Q9HCM9 518 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 SFMBT1Q9UHJ3 866 aa4.97□□□□□ -1.61
CASC4-210ENST00000559550 CCDC163A0A0D9SF12 145 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 A0A1B0GTL3 188 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 TCRBV5S2A0A599 114 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 FAM47E-STBD1D6RA91 191 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 WNT9AO14904 365 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 KCNQ2O43526 872 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 C8BP07358 591 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 SRGAP2CP0DJJ0 459 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 NCAM1P13591 858 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 ZNF20P17024 532 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 STAT5AP42229 794 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 TARBP2Q15633 366 aaKnown RBP4.96□□□□□ -1.62
CASC4-210ENST00000559550 LIPIQ6XZB0 460 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 OTOP3Q7RTS5 596 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 MIB1Q86YT6 1006 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 CPA5Q8WXQ8 436 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 SPATA25Q9BR10 227 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 RNF38Q9H0F5 515 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 SLC6A20Q9NP91 592 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 ZNF652Q9Y2D9 606 aa4.96□□□□□ -1.62
CASC4-210ENST00000559550 PCDHB4Q9Y5E5 795 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms