RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TUT1Q9H6E5 874 aaKnown RBP4.99□□□□□ -1.61
SNX1-205ENST00000559339 AZI2Q9H6S1 392 aa4.99□□□□□ -1.61
SNX1-205ENST00000559339 NCOA5Q9HCD5 579 aaKnown RBP4.99□□□□□ -1.61
SNX1-205ENST00000559339 JADE2Q9NQC1 790 aa4.99□□□□□ -1.61
SNX1-205ENST00000559339 TRMT13Q9NUP7 481 aaKnown RBP4.99□□□□□ -1.61
SNX1-205ENST00000559339 TBX21Q9UL17 535 aa4.99□□□□□ -1.61
SNX1-205ENST00000559339 NID2Q14112 1375 aa4.99□□□□□ -1.61
SNX1-205ENST00000559339 SMCHD1A6NHR9 2005 aa4.99□□□□□ -1.61
SNX1-205ENST00000559339 BAZ2BQ9UIF8 2168 aaKnown RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 ST18O60284 1047 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 SORBS3O60504 671 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 PPFIA3O75145 1194 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 PARNO95453 639 aaKnown RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 F2P00734 622 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 CD4P01730 458 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 PFKMP08237 780 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 ZNF286BP0CG31 522 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 CSF2RAP15509 400 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 ITGB5P18084 799 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 CLK2P49760 499 aaKnown RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 PSEN2P49810 448 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 FXR1P51114 621 aaKnown RBP eCLIP4.98□□□□□ -1.61
SNX1-205ENST00000559339 AK2P54819 239 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 ARHGAP4P98171 946 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 SP2Q02086 613 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 SP4Q02446 784 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 SCRN1Q12765 414 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 TRIM29Q14134 588 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 MFSD10Q14728 455 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 NTRK3Q16288 839 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 PKN1Q16512 942 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 JAKMIP3Q5VZ66 844 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 TYW1BQ6NUM6 668 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 GPR153Q6NV75 609 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 PSRC1Q6PGN9 363 aaPredicted RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 SESTD1Q86VW0 696 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 PIP4P2Q8N4L2 257 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 CAGE1Q8TC20 777 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 SEPT1Q8WYJ6 367 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 GLG1Q92896 1179 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 RNPC3Q96LT9 517 aaKnown RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 MXRA8Q9BRK3 442 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 LARP6Q9BRS8 491 aaKnown RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 ALG1Q9BT22 464 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 TRPV6Q9H1D0 765 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 BRMS1Q9HCU9 246 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 JPH1Q9HDC5 661 aaPredicted RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 KCNH7Q9NS40 1196 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 ERAP1Q9NZ08 941 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 VPS54Q9P1Q0 977 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 TPCN1Q9ULQ1 816 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 FARP1Q9Y4F1 1045 aaPredicted RBP4.98□□□□□ -1.61
SNX1-205ENST00000559339 UBIAD1Q9Y5Z9 338 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 TRIOBPQ9H2D6 2365 aa4.98□□□□□ -1.61
SNX1-205ENST00000559339 GRIN2DO15399 1336 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 NRCAMQ92823 1304 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 C17orf102A2RUQ5 167 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 IPO5O00410 1097 aaKnown RBP4.97□□□□□ -1.61
SNX1-205ENST00000559339 MEIS1O00470 390 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PFKFB2O60825 505 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 SEC24BO95487 1268 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 FGBP02675 491 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 LGALS2P05162 132 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 CYP3A4P08684 503 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 CYP2C9P11712 490 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 ACTN1P12814 892 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 HOXD8P13378 290 aaPredicted RBP4.97□□□□□ -1.61
SNX1-205ENST00000559339 KCNA2P16389 499 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 ITGB8P26012 769 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 CYP2C18P33260 490 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 RFC2P35250 354 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 TCF7P36402 384 aaPredicted RBP4.97□□□□□ -1.61
SNX1-205ENST00000559339 SLC26A2P50443 739 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 USP11P51784 963 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 CCL23P55773 120 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PTK7Q13308 1070 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 SHHQ15465 462 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 C8orf34Q49A92 452 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PRR16Q569H4 304 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 NIPA1Q7RTP0 329 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PLA2G4DQ86XP0 818 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 BLIDQ8IZY5 108 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 KAT2BQ92831 832 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 ATP6V0A1Q93050 837 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 IL17RAQ96F46 866 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PGBD1Q96JS3 809 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 GPR20Q99678 358 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 ZNF577Q9BSK1 485 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 C16orf70Q9BSU1 422 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 NOC4LQ9BVI4 516 aaKnown RBP4.97□□□□□ -1.61
SNX1-205ENST00000559339 SMARCAD1Q9H4L7 1026 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 TBC1D22BQ9NU19 505 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 TMEM260Q9NX78 707 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PKD2L1Q9P0L9 805 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 ORC3Q9UBD5 711 aaPredicted RBP4.97□□□□□ -1.61
SNX1-205ENST00000559339 HDAC6Q9UBN7 1215 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 SLC9A2Q9UBY0 812 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 GTF2IRD1Q9UHL9 959 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 PCDHA4Q9UN74 947 aa4.97□□□□□ -1.61
SNX1-205ENST00000559339 LIMCH1Q9UPQ0 1083 aa4.97□□□□□ -1.61
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