RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 METTL7BQ6UX53 244 aa21.32■■□□□ 1
CASC4-209ENST00000559222 TRIM50Q86XT4 487 aa21.32■■□□□ 1
CASC4-209ENST00000559222 FAM126BQ8IXS8 530 aa21.32■■□□□ 1
CASC4-209ENST00000559222 LENG9Q96B70 501 aa21.32■■□□□ 1
CASC4-209ENST00000559222 TRIM43Q96BQ3 446 aaPredicted RBP21.32■■□□□ 1
CASC4-209ENST00000559222 GPR20Q99678 358 aa21.32■■□□□ 1
CASC4-209ENST00000559222 AGO4Q9HCK5 861 aaKnown RBP21.32■■□□□ 1
CASC4-209ENST00000559222 PRDM5Q9NQX1 630 aaPredicted RBP21.32■■□□□ 1
CASC4-209ENST00000559222 NR2E3Q9Y5X4 410 aa21.32■■□□□ 1
CASC4-209ENST00000559222 CEP290O15078 2479 aa21.31■■□□□ 1
CASC4-209ENST00000559222 CABYRO75952 493 aa21.31■■□□□ 1
CASC4-209ENST00000559222 ITGB8P26012 769 aa21.31■■□□□ 1
CASC4-209ENST00000559222 ZNF76P36508 570 aa21.31■■□□□ 1
CASC4-209ENST00000559222 FAAP100Q0VG06 881 aa21.31■■□□□ 1
CASC4-209ENST00000559222 NEDD9Q14511 834 aa21.31■■□□□ 1
CASC4-209ENST00000559222 NBPF20Q3BBV1 942 aa21.31■■□□□ 1
CASC4-209ENST00000559222 KRT40Q6A162 431 aa21.31■■□□□ 1
CASC4-209ENST00000559222 ANKRD33Q7Z3H0 272 aa21.31■■□□□ 1
CASC4-209ENST00000559222 PLA2G4DQ86XP0 818 aa21.31■■□□□ 1
CASC4-209ENST00000559222 TNFRSF25Q93038 417 aa21.31■■□□□ 1
CASC4-209ENST00000559222 SENP7Q9BQF6 1050 aa21.31■■□□□ 1
CASC4-209ENST00000559222 LLPHQ9BRT6 129 aaKnown RBP21.31■■□□□ 1
CASC4-209ENST00000559222 TDP2O95551 362 aa21.3■■□□□ 1
CASC4-209ENST00000559222 DGKDQ16760 1214 aa21.3■■□□□ 1
CASC4-209ENST00000559222 INF2Q27J81 1249 aa21.3■■□□□ 1
CASC4-209ENST00000559222 BRDTQ58F21 947 aaPredicted RBP21.3■■□□□ 1
CASC4-209ENST00000559222 WASF1Q92558 559 aa21.3■■□□□ 1
CASC4-209ENST00000559222 TRPV6Q9H1D0 765 aa21.3■■□□□ 1
CASC4-209ENST00000559222 TRIP12Q14669 1992 aaPredicted RBP21.3■■□□□ 1
CASC4-209ENST00000559222 WDR81Q562E7 1941 aa21.29■■□□□ 1
CASC4-209ENST00000559222 DDX39AO00148 427 aaKnown RBP21.29■■□□□ 1
CASC4-209ENST00000559222 B4GALT4O60513 344 aa21.29■■□□□ 1
CASC4-209ENST00000559222 F2P00734 622 aa21.29■■□□□ 1
CASC4-209ENST00000559222 MMP1P03956 469 aa21.29■■□□□ 1
CASC4-209ENST00000559222 LGALS2P05162 132 aa21.29■■□□□ 1
CASC4-209ENST00000559222 CLTBP09497 229 aa21.29■■□□□ 1
CASC4-209ENST00000559222 CIITAP33076 1130 aa21.29■■□□□ 1
CASC4-209ENST00000559222 PRR16Q569H4 304 aa21.29■■□□□ 1
CASC4-209ENST00000559222 MCTP2Q6DN12 878 aa21.29■■□□□ 1
CASC4-209ENST00000559222 GALNT17Q6IS24 598 aa21.29■■□□□ 1
CASC4-209ENST00000559222 FAM177A1Q8N128 213 aaPredicted RBP21.29■■□□□ 1
CASC4-209ENST00000559222 GJA10Q969M2 543 aa21.29■■□□□ 1
CASC4-209ENST00000559222 CDHR1Q96JP9 859 aa21.29■■□□□ 1
CASC4-209ENST00000559222 C16orf70Q9BSU1 422 aa21.29■■□□□ 1
CASC4-209ENST00000559222 TRMT13Q9NUP7 481 aaKnown RBP21.29■■□□□ 1
CASC4-209ENST00000559222 GSTTP1A0A1W2PQM5 241 aa21.28■■□□□ 1
CASC4-209ENST00000559222 HAS3O00219 553 aa21.28■■□□□ 1
CASC4-209ENST00000559222 WNT7AO00755 349 aa21.28■■□□□ 1
CASC4-209ENST00000559222 KPNA6O60684 536 aa21.28■■□□□ 1
CASC4-209ENST00000559222 CD4P01730 458 aa21.28■■□□□ 1
CASC4-209ENST00000559222 XBP1P17861 261 aa21.28■■□□□ 1
CASC4-209ENST00000559222 PSEN2P49810 448 aa21.28■■□□□ 1
CASC4-209ENST00000559222 HIC1Q14526 733 aa21.28■■□□□ 1
CASC4-209ENST00000559222 NONOQ15233 471 aaKnown RBP eCLIP21.28■■□□□ 1
CASC4-209ENST00000559222 PIK3AP1Q6ZUJ8 805 aa21.28■■□□□ 1
CASC4-209ENST00000559222 NIPA1Q7RTP0 329 aa21.28■■□□□ 1
CASC4-209ENST00000559222 KRT25Q7Z3Z0 450 aa21.28■■□□□ 1
CASC4-209ENST00000559222 BTBD18B2RXH4 712 aa21.27■■□□□ 1
CASC4-209ENST00000559222 NOP56O00567 594 aaKnown RBP21.27■■□□□ 1
CASC4-209ENST00000559222 DHX15O43143 795 aaKnown RBP21.27■■□□□ 1
CASC4-209ENST00000559222 CCNE2O96020 404 aa21.27■■□□□ 1
CASC4-209ENST00000559222 KRT2P35908 639 aa21.27■■□□□ 1
CASC4-209ENST00000559222 MAGEA10P43363 369 aaPredicted RBP21.27■■□□□ 1
CASC4-209ENST00000559222 MDM2Q00987 491 aaPredicted RBP21.27■■□□□ 1
CASC4-209ENST00000559222 MFSD10Q14728 455 aa21.27■■□□□ 1
CASC4-209ENST00000559222 FAM47CQ5HY64 1035 aa21.27■■□□□ 1
CASC4-209ENST00000559222 UTP14CQ5TAP6 766 aaKnown RBP21.27■■□□□ 1
CASC4-209ENST00000559222 CHRDL2Q6WN34 429 aa21.27■■□□□ 1
CASC4-209ENST00000559222 DIS3L2Q8IYB7 885 aaKnown RBP21.27■■□□□ 1
CASC4-209ENST00000559222 TBX21Q9UL17 535 aa21.27■■□□□ 1
CASC4-209ENST00000559222 UMODL1Q5DID0 1318 aa21.27■□□□□ 0.99
CASC4-209ENST00000559222 SLC37A4O43826 429 aa21.26■□□□□ 0.99
CASC4-209ENST00000559222 TCF7P36402 384 aaPredicted RBP21.26■□□□□ 0.99
CASC4-209ENST00000559222 KIAA0753Q2KHM9 967 aa21.26■□□□□ 0.99
CASC4-209ENST00000559222 TOX2Q96NM4 488 aa21.26■□□□□ 0.99
CASC4-209ENST00000559222 CTAGE1Q96RT6 745 aa21.26■□□□□ 0.99
CASC4-209ENST00000559222 PCYT2Q99447 389 aa21.26■□□□□ 0.99
CASC4-209ENST00000559222 JPH1Q9HDC5 661 aaPredicted RBP21.26■□□□□ 0.99
CASC4-209ENST00000559222 NFASCO94856 1347 aa21.26■□□□□ 0.99
CASC4-209ENST00000559222 CCDC194A0A1B0GVG4 234 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 DCDC2CA8MYV0 355 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 MSH4O15457 936 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 MAFGO15525 162 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 PPFIA4O75335 1185 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 HMGN5P82970 282 aaKnown RBP21.25■□□□□ 0.99
CASC4-209ENST00000559222 ZNF200P98182 395 aaPredicted RBP21.25■□□□□ 0.99
CASC4-209ENST00000559222 GDF6Q6KF10 455 aaPredicted RBP21.25■□□□□ 0.99
CASC4-209ENST00000559222 C8orf76Q96K31 380 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 TANC1Q9C0D5 1861 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 TMEM39AQ9NV64 488 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 HDAC6Q9UBN7 1215 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 SLC9A2Q9UBY0 812 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 MROH7Q68CQ1 1323 aa21.25■□□□□ 0.99
CASC4-209ENST00000559222 SCN5AQ14524 2016 aa21.24■□□□□ 0.99
CASC4-209ENST00000559222 IPO5O00410 1097 aaKnown RBP21.24■□□□□ 0.99
CASC4-209ENST00000559222 KIAA0355O15063 1070 aa21.24■□□□□ 0.99
CASC4-209ENST00000559222 CYP2C9P11712 490 aa21.24■□□□□ 0.99
CASC4-209ENST00000559222 USP11P51784 963 aa21.24■□□□□ 0.99
CASC4-209ENST00000559222 ACTR2P61160 394 aa21.24■□□□□ 0.99
CASC4-209ENST00000559222 LETM2Q2VYF4 491 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms