RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 HMGB2P26583 209 aaKnown RBP6.63□□□□□ -1.35
CASC4-207ENST00000559037 RPL10P27635 214 aaKnown RBP6.63□□□□□ -1.35
CASC4-207ENST00000559037 KDRP35968 1356 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 NCAPHQ15003 741 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 PPP2R5EQ16537 467 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 GNPTABQ3T906 1256 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 DCAF15Q66K64 600 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 BHLHE22Q8NFJ8 381 aaPredicted RBP6.63□□□□□ -1.35
CASC4-207ENST00000559037 HAUS7Q99871 368 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 SYT17Q9BSW7 474 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 GOLGA2P5Q9HBQ8 144 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 TNFRSF10DQ9UBN6 386 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 ZMYM5Q9UJ78 669 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 DIS3Q9Y2L1 958 aaKnown RBP6.63□□□□□ -1.35
CASC4-207ENST00000559037 COL5A3P25940 1745 aaPredicted RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 PPM1BO75688 479 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 FARP2O94887 1054 aaPredicted RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 VAV1P15498 845 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 CTSKP43235 329 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 NOP2P46087 812 aaKnown RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 AMOTQ4VCS5 1084 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 PLEKHO1Q53GL0 409 aaPredicted RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 HEATR6Q6AI08 1181 aaKnown RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 SULT6B1Q6IMI4 303 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 OGFOD2Q6N063 350 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 GMLQ99445 158 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.356e-12■□□□□ 8.7
CASC4-207ENST00000559037 G6PC3Q9BUM1 346 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 SLC6A17Q9H1V8 727 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 TFCP2L1Q9NZI6 479 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 PPP1R1BQ9UD71 204 aaPredicted RBP6.62□□□□□ -1.35
CASC4-207ENST00000559037 ASAP1Q9ULH1 1129 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 DLG5Q8TDM6 1919 aa6.62□□□□□ -1.35
CASC4-207ENST00000559037 PALLDQ8WX93 1383 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 LRRC10BA6NIK2 292 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 CBFA2T2O43439 604 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
CASC4-207ENST00000559037 FGRP09769 529 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 ZNF445P59923 1031 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 POU4F1Q01851 419 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 CC2D1BQ5T0F9 858 aaKnown RBP6.61□□□□□ -1.35
CASC4-207ENST00000559037 CYP2R1Q6VVX0 501 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 IRF2BP1Q8IU81 584 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 CRACR2BQ8N4Y2 399 aaPredicted RBP6.61□□□□□ -1.35
CASC4-207ENST00000559037 FIBCD1Q8N539 461 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 KLHL25Q9H0H3 589 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 SP110Q9HB58 689 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 TMOD3Q9NYL9 352 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 ZNF451Q9Y4E5 1061 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 ADAMTS7Q9UKP4 1686 aa6.61□□□□□ -1.35
CASC4-207ENST00000559037 MAP3K5Q99683 1374 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 SIPA1L3O60292 1781 aaPredicted RBP6.6□□□□□ -1.35
CASC4-207ENST00000559037 ANKRD34BA5PLL1 514 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
CASC4-207ENST00000559037 RBAK-RBAKDNI3L0D1 243 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 NRDCO43847 1150 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 HSP90AB1P08238 724 aaKnown RBP6.6□□□□□ -1.35
CASC4-207ENST00000559037 VHLLQ6RSH7 139 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 CRTC3Q6UUV7 619 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 AMIGO3Q86WK7 504 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 FAM169BQ8N8A8 192 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 RCC1LQ96I51 464 aaKnown RBP6.6□□□□□ -1.35
CASC4-207ENST00000559037 ACTR10Q9NZ32 417 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
CASC4-207ENST00000559037 KDM6AO15550 1401 aaPredicted RBP6.59□□□□□ -1.35
CASC4-207ENST00000559037 A0A1W2PQ45 241 aaPredicted RBP6.59□□□□□ -1.35
CASC4-207ENST00000559037 A0A1W2PQY0 241 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 DIAPH1O60610 1272 aaKnown RBP6.59□□□□□ -1.35
CASC4-207ENST00000559037 GRB10Q13322 594 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 ITPK1Q13572 414 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 SLC14A2Q15849 920 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 ZNF530Q6P9A1 599 aaPredicted RBP6.59□□□□□ -1.35
CASC4-207ENST00000559037 KLHL6Q8WZ60 621 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 FAM84AQ96KN4 292 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 PPP1R16BQ96T49 567 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 SLC38A3Q99624 504 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 CDADC1Q9BWV3 514 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 KRTAP9-9Q9BYP9 154 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 CRTAC1Q9NQ79 661 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 ERVK13-1Q9NX77 482 aa6.59□□□□□ -1.35
CASC4-207ENST00000559037 YBX2Q9Y2T7 364 aaKnown RBP6.59□□□□□ -1.35
CASC4-207ENST00000559037 COL3A1P02461 1466 aaPredicted RBP6.59□□□□□ -1.36
CASC4-207ENST00000559037 CCDC88AQ3V6T2 1871 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 WTIPA6NIX2 430 aaPredicted RBP6.58□□□□□ -1.36
CASC4-207ENST00000559037 H0Y8X5 98 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 MEIS1O00470 390 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 FKTNO75072 461 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 EPHX1P07099 455 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 HMOX1P09601 288 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 POLD1P28340 1107 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 ERVFC1P60507 584 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 MTHFSDQ2M296 383 aaKnown RBP6.58□□□□□ -1.36
CASC4-207ENST00000559037 GALNT18Q6P9A2 607 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms