RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TMTC3Q6ZXV5 915 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 LRRC8DQ7L1W4 858 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 CATIPQ7Z7H3 387 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 SERINC5Q86VE9 423 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 RAB11FIP4Q86YS3 637 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 HERC6Q8IVU3 1022 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 C7orf31Q8N865 590 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 FANCBQ8NB91 859 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 CAGE1Q8TC20 777 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 PHOSPHO2Q8TCD6 241 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 PIBF1Q8WXW3 757 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 KCNB2Q92953 911 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 TMEM87BQ96K49 555 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 SPATA33Q96N06 139 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 GPR20Q99678 358 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ALG1Q9BT22 464 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 LRRC2Q9BYS8 371 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 SLC28A3Q9HAS3 691 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 FAM217BQ9NTX9 383 aaPredicted RBP6.41□□□□□ -1.38
SMAD3-209ENST00000558894 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 PKD1L2Q7Z442 2459 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 UNC79Q9P2D8 2635 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 GSTTP1A0A1W2PQM5 241 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 LCHNA4D1U4 455 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 H3BRB1 525 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 RFXAPO00287 272 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 ADAMTS3O15072 1205 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 TREHO43280 583 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 STAM2O75886 525 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 BAIAP3O94812 1187 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 LGALS2P05162 132 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 KCNA2P16389 499 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 CHMP4BP1P59074 171 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 WDR5P61964 334 aaKnown RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 TRAF1Q13077 416 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 SART3Q15020 963 aaKnown RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 METTL7BQ6UX53 244 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 CENPQQ7L2Z9 268 aaPredicted RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 TMTC2Q8N394 836 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 RETREG2Q8NC44 543 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 CTCFLQ8NI51 663 aaPredicted RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 RRP36Q96EU6 259 aaKnown RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 TCEANC2Q96MN5 208 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 SLC9A7Q96T83 725 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 SENP7Q9BQF6 1050 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 LZTS2Q9BRK4 669 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 KATNAL1Q9BW62 490 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 MTIF3Q9H2K0 278 aaKnown RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 RNPEPQ9H4A4 650 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 TUT1Q9H6E5 874 aaKnown RBP6.4□□□□□ -1.38
SMAD3-209ENST00000558894 MSRAQ9UJ68 235 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 UBIAD1Q9Y5Z9 338 aa6.4□□□□□ -1.38
SMAD3-209ENST00000558894 CNTNAP5Q8WYK1 1306 aa6.4□□□□□ -1.39
SMAD3-209ENST00000558894 MYH9P35579 1960 aaKnown RBP6.4□□□□□ -1.39
SMAD3-209ENST00000558894 EVPLQ92817 2033 aa6.4□□□□□ -1.39
SMAD3-209ENST00000558894 FNDC1Q4ZHG4 1894 aaPredicted RBP6.39□□□□□ -1.39
SMAD3-209ENST00000558894 ZBBXA8MT70 800 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 FIBPO43427 364 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 GJB5O95377 273 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 SMIM10L2AP0DMW4 78 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 SMIM10L2BP0DMW5 78 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CALM1P0DP23 149 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CALM2P0DP24 149 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CALM3P0DP25 149 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 ACTN1P12814 892 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CDC27P30260 824 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 KIF5BP33176 963 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CLK2P49760 499 aaKnown RBP6.39□□□□□ -1.39
SMAD3-209ENST00000558894 UBE2SQ16763 222 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 FAM26DQ5JW98 314 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 MARCH8Q5T0T0 291 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 PPP2R2DQ66LE6 453 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 KRT40Q6A162 431 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 WWC2Q6AWC2 1192 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 XRRA1Q6P2D8 792 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CNKSR3Q6P9H4 555 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 APOA5Q6Q788 366 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CASC1Q6TDU7 716 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CCDC155Q8N6L0 562 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CYP2W1Q8TAV3 490 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CRYGNQ8WXF5 182 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 NEK1Q96PY6 1258 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 PCYT2Q99447 389 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 CERS4Q9HA82 394 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 MLXIPQ9HAP2 919 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 ANO2Q9NQ90 1003 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 SLC12A7Q9Y666 1083 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 MTCH2Q9Y6C9 303 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 NID2Q14112 1375 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 PLXNA4Q9HCM2 1894 aa6.39□□□□□ -1.39
SMAD3-209ENST00000558894 TTC3P53804 2025 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 CCDC69A6NI79 296 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 EDIL3O43854 480 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 LGR5O75473 907 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms