RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 AMOTQ4VCS5 1084 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 GTF2IRD2BQ6EKJ0 949 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 THAP5Q7Z6K1 395 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 GTF2IRD2Q86UP8 949 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 FAM177A1Q8N128 213 aaPredicted RBP7.83□□□□□ -1.16
LRRC28-209ENST00000558861 CRACR2BQ8N4Y2 399 aaPredicted RBP7.83□□□□□ -1.16
LRRC28-209ENST00000558861 MCMBPQ9BTE3 642 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 AARSD1Q9BTE6 412 aaKnown RBP7.83□□□□□ -1.16
LRRC28-209ENST00000558861 CWC22Q9HCG8 908 aaKnown RBP7.83□□□□□ -1.16
LRRC28-209ENST00000558861 FANCLQ9NW38 375 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 TOGARAM1Q9Y4F4 1720 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 CEMIPQ8WUJ3 1361 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 MRC1P22897 1456 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 STXBP3O00186 592 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 CAPNS1P04632 268 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 CD3EP07766 207 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 CD96P40200 585 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 GRB10Q13322 594 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 HSP90AA2PQ14568 343 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-209ENST00000558861 SF1Q15637 639 aaKnown RBP7.82□□□□□ -1.16
LRRC28-209ENST00000558861 PLEKHO1Q53GL0 409 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-209ENST00000558861 CWF19L1Q69YN2 538 aaKnown RBP7.82□□□□□ -1.16
LRRC28-209ENST00000558861 HRASLS5Q96KN8 279 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 TMEM260Q9NX78 707 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 SNX11Q9Y5W9 270 aa7.82□□□□□ -1.16
LRRC28-209ENST00000558861 TRAV20A0A0B4J274 112 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 ENPP3O14638 875 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 KCNQ2O43526 872 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 SYPP08247 313 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 IFNGR1P15260 489 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 BMP8BP34820 402 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 AMPD2Q01433 879 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 AOC3Q16853 763 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 FAM209AQ5JX71 171 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-209ENST00000558861 IFNL2Q8IZJ0 200 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 EXOC2Q96KP1 924 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 IER2Q9BTL4 223 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 FOXP3Q9BZS1 431 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 NKX2-4Q9H2Z4 354 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 PCDHA11Q9Y5I1 949 aa7.81□□□□□ -1.16
LRRC28-209ENST00000558861 TNS1Q9HBL0 1735 aaKnown RBP7.81□□□□□ -1.16
LRRC28-209ENST00000558861 SBF2Q86WG5 1849 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 PRODHO43272 600 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 FKTNO75072 461 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 CDC45O75419 566 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 MED26O95402 600 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 ESR1P03372 595 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 L1CAMP32004 1257 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 GRIK1P39086 918 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 POU4F1Q01851 419 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 CREG2Q8IUH2 290 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 ZSWIM2Q8NEG5 633 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 IL17REQ8NFR9 667 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 TCFL5Q9UL49 500 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 MAP3K5Q99683 1374 aa7.8□□□□□ -1.16
LRRC28-209ENST00000558861 NHSQ6T4R5 1651 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 RNMTO43148 476 aaKnown RBP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 ZNF205O95201 554 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 FGFR1P11362 822 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 PABPC1P11940 636 aaKnown RBP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 VAV1P15498 845 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 PCBP3P57721 371 aaKnown RBP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 PRKCQQ04759 706 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 CYP4F3Q08477 520 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 BNIP3Q12983 259 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 WDR43Q15061 677 aaKnown RBP eCLIP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 LONRF2Q1L5Z9 754 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 TMPRSS7Q7RTY8 843 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 HOMER1Q86YM7 354 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 CCDC146Q8IYE0 955 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 ASB11Q8WXH4 323 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 PIGBQ92521 554 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 APPBP2Q92624 585 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 OSBP2Q969R2 916 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 RUNDC1Q96C34 613 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 FCRL3Q96P31 734 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 CDC6Q99741 560 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 SLC12A9Q9BXP2 914 aa7.79□□□□□ -1.16
LRRC28-209ENST00000558861 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-209ENST00000558861 DOT1LQ8TEK3 1739 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 ERVV-2B6SEH9 535 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
LRRC28-209ENST00000558861 COBLO75128 1261 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 HSP90AB1P08238 724 aaKnown RBP7.78□□□□□ -1.16
LRRC28-209ENST00000558861 SNRPB2P08579 225 aaKnown RBP7.78□□□□□ -1.16
LRRC28-209ENST00000558861 SSTR4P31391 388 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 GFRA1P56159 465 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 EGR3Q06889 387 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 SCRN1Q12765 414 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 IKZF1Q13422 519 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 PRSS53Q2L4Q9 553 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 TKFCQ3LXA3 575 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 RTP2Q5QGT7 225 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 INTS5Q6P9B9 1019 aaKnown RBP7.78□□□□□ -1.16
LRRC28-209ENST00000558861 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms