RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 ZNF286BP0CG31 522 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 HOXD8P13378 290 aaPredicted RBP17.61■□□□□ 0.41
RPL28-206ENST00000558752 DEFB103AP81534 67 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 GPNMBQ14956 572 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 GNPTABQ3T906 1256 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 TMEM31Q5JXX7 168 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 CELF3Q5SZQ8 465 aaKnown RBP17.61■□□□□ 0.41
RPL28-206ENST00000558752 ZNF618Q5T7W0 954 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 SAMD11Q96NU1 681 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 PDCD2LQ9BRP1 358 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 C11orf16Q9NQ32 467 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 MTUS1Q9ULD2 1270 aa17.61■□□□□ 0.41
RPL28-206ENST00000558752 PNMA6FA0A0J9YX94 578 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 LCHNA4D1U4 455 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 RSPH10B2B2RC85 870 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 GCOM1H8Y6P7 765 aaPredicted RBP17.6■□□□□ 0.41
RPL28-206ENST00000558752 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
RPL28-206ENST00000558752 GGPS1O95749 300 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 RSPH10BP0C881 870 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 POLR2MP0CAP2 368 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 GNAT1P11488 350 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 CCND2P30279 289 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 THPOP40225 353 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 PGM5Q15124 567 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 PTPROQ16827 1216 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 SYNE3Q6ZMZ3 975 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 DHX32Q7L7V1 743 aaKnown RBP17.6■□□□□ 0.41
RPL28-206ENST00000558752 SPRED2Q7Z698 418 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 VSIG10LQ86VR7 867 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 SGMS1Q86VZ5 419 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 GDPD5Q8WTR4 605 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 KCNB2Q92953 911 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 SUGCTQ9HAC7 445 aa17.6■□□□□ 0.41
RPL28-206ENST00000558752 C17orf102A2RUQ5 167 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 LINC01553A4QN01 128 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
RPL28-206ENST00000558752 CAND2O75155 1236 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 STAM2O75886 525 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 PUS10Q3MIT2 529 aaKnown RBP17.59■□□□□ 0.41
RPL28-206ENST00000558752 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 SPZ1Q9BXG8 430 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 SENP2Q9HC62 589 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 SLC12A7Q9Y666 1083 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 MYH7BA7E2Y1 1941 aa17.59■□□□□ 0.41
RPL28-206ENST00000558752 FAM86C2PA6NEL3 165 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 H3BRB1 525 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.4
RPL28-206ENST00000558752 NEDD9Q14511 834 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 TRIM71Q2Q1W2 868 aaKnown RBP17.58■□□□□ 0.4
RPL28-206ENST00000558752 FAM117BQ6P1L5 589 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.4
RPL28-206ENST00000558752 SERINC5Q86VE9 423 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 MYOCDQ8IZQ8 938 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 SEPT8Q92599 483 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 ATP6V0A1Q93050 837 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 USP26Q9BXU7 913 aa17.58■□□□□ 0.4
RPL28-206ENST00000558752 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
RPL28-206ENST00000558752 UBE2ZQ9H832 354 aaPredicted RBP17.58■□□□□ 0.4
RPL28-206ENST00000558752 TRANK1O15050 2925 aa17.57■□□□□ 0.4
RPL28-206ENST00000558752 CYTH3O43739 400 aa17.57■□□□□ 0.4
RPL28-206ENST00000558752 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
RPL28-206ENST00000558752 DBF4BQ8NFT6 615 aa17.57■□□□□ 0.4
RPL28-206ENST00000558752 RRP36Q96EU6 259 aaKnown RBP17.57■□□□□ 0.4
RPL28-206ENST00000558752 CD320Q9NPF0 282 aa17.57■□□□□ 0.4
RPL28-206ENST00000558752 FAM50BQ9Y247 325 aa17.57■□□□□ 0.4
RPL28-206ENST00000558752 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.56■□□□□ 0.4
RPL28-206ENST00000558752 EIF5BO60841 1220 aaKnown RBP17.56■□□□□ 0.4
RPL28-206ENST00000558752 GPR37L1O60883 481 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 UBA1P22314 1058 aaKnown RBP17.56■□□□□ 0.4
RPL28-206ENST00000558752 HOXA13P31271 388 aaPredicted RBP17.56■□□□□ 0.4
RPL28-206ENST00000558752 HSPA4P34932 840 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 LEXMQ3ZCV2 418 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 TIGD5Q53EQ6 642 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 PLEKHG4Q58EX7 1191 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 HOMER1Q86YM7 354 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 RASEFQ8IZ41 740 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 APBB2Q92870 758 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 PIGSQ96S52 555 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 ZNF215Q9UL58 517 aaPredicted RBP17.56■□□□□ 0.4
RPL28-206ENST00000558752 PTPRSQ13332 1948 aa17.56■□□□□ 0.4
RPL28-206ENST00000558752 OPLAHO14841 1288 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 RGS20O76081 388 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 PSMA5P28066 241 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 HTRA4P83105 476 aaPredicted RBP17.55■□□□□ 0.4
RPL28-206ENST00000558752 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
RPL28-206ENST00000558752 TRAF7Q6Q0C0 670 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 FCHSD1Q86WN1 690 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 MRPL38Q96DV4 380 aaKnown RBP17.55■□□□□ 0.4
RPL28-206ENST00000558752 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 RBM28Q9NW13 759 aaKnown RBP17.55■□□□□ 0.4
RPL28-206ENST00000558752 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
RPL28-206ENST00000558752 SIP14410 1827 aa17.55■□□□□ 0.4
RPL28-206ENST00000558752 COL4A4P53420 1690 aaPredicted RBP17.55■□□□□ 0.4
RPL28-206ENST00000558752 PPP1R11O60927 126 aaPredicted RBP17.54■□□□□ 0.4
RPL28-206ENST00000558752 LGALS2P05162 132 aa17.54■□□□□ 0.4
RPL28-206ENST00000558752 SMIM10L2AP0DMW4 78 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms