RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 IFIT2P09913 472 aaKnown RBP14.05□□□□□ -0.16
SMAD3-206ENST00000558739 TDO2P48775 406 aa14.05□□□□□ -0.16
SMAD3-206ENST00000558739 DGKDQ16760 1214 aa14.05□□□□□ -0.16
SMAD3-206ENST00000558739 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
SMAD3-206ENST00000558739 DHX37Q8IY37 1157 aaKnown RBP14.05□□□□□ -0.16
SMAD3-206ENST00000558739 SEPT8Q92599 483 aa14.05□□□□□ -0.16
SMAD3-206ENST00000558739 CLP1Q92989 425 aaKnown RBP14.05□□□□□ -0.16
SMAD3-206ENST00000558739 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
SMAD3-206ENST00000558739 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-206ENST00000558739 ITGB1P05556 798 aa14.04□□□□□ -0.16
SMAD3-206ENST00000558739 RB1P06400 928 aa14.04□□□□□ -0.16
SMAD3-206ENST00000558739 SYDE2Q5VT97 1194 aa14.04□□□□□ -0.16
SMAD3-206ENST00000558739 SUSD6Q92537 303 aa14.04□□□□□ -0.16
SMAD3-206ENST00000558739 COL20A1Q9P218 1284 aa14.04□□□□□ -0.16
SMAD3-206ENST00000558739 PLAGL2Q9UPG8 496 aa14.04□□□□□ -0.16
SMAD3-206ENST00000558739 M0R2C6 588 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 TREHO43280 583 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 BRD1O95696 1058 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 ATP5JP18859 108 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 GIMAP6Q6P9H5 292 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 CLASRPQ8N2M8 674 aaKnown RBP14.03□□□□□ -0.16
SMAD3-206ENST00000558739 KREMEN2Q8NCW0 462 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 DNERQ8NFT8 737 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 TBC1D5Q92609 795 aa14.03□□□□□ -0.16
SMAD3-206ENST00000558739 SPEGQ15772 3267 aa14.02□□□□□ -0.16
SMAD3-206ENST00000558739 PER2O15055 1255 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 GPAA1O43292 621 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 NUBP1P53384 320 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 KIAA2013Q8IYS2 634 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 KATNAL1Q9BW62 490 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 APOL5Q9BWW9 433 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
SMAD3-206ENST00000558739 DDX41Q9UJV9 622 aaKnown RBP14.02□□□□□ -0.17
SMAD3-206ENST00000558739 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.17
SMAD3-206ENST00000558739 MRPL42Q9Y6G3 142 aaKnown RBP14.02□□□□□ -0.17
SMAD3-206ENST00000558739 BTG3Q14201 252 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-206ENST00000558739 ZKSCAN2Q63HK3 967 aa14.01□□□□□ -0.17
SMAD3-206ENST00000558739 PPTC7Q8NI37 304 aa14.01□□□□□ -0.17
SMAD3-206ENST00000558739 SPPL3Q8TCT6 385 aa14.01□□□□□ -0.17
SMAD3-206ENST00000558739 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
SMAD3-206ENST00000558739 EMID1Q96A84 441 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-206ENST00000558739 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
SMAD3-206ENST00000558739 RALYQ9UKM9 306 aaKnown RBP14.01□□□□□ -0.17
SMAD3-206ENST00000558739 DOCK5Q9H7D0 1870 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 APPP05067 770 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 HOXD8P13378 290 aaPredicted RBP14□□□□□ -0.17
SMAD3-206ENST00000558739 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
SMAD3-206ENST00000558739 HOXC8P31273 242 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 HSDL1Q3SXM5 330 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 USH1GQ495M9 461 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 MCTP2Q6DN12 878 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 BTNL9Q6UXG8 535 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 POF1BQ8WVV4 589 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 ZNF689Q96CS4 500 aaPredicted RBP14□□□□□ -0.17
SMAD3-206ENST00000558739 KIF1BPQ96EK5 621 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
SMAD3-206ENST00000558739 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
SMAD3-206ENST00000558739 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 GATMP50440 423 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 PPARAQ07869 468 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 CWF19L1Q69YN2 538 aaKnown RBP13.99□□□□□ -0.17
SMAD3-206ENST00000558739 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-206ENST00000558739 IFNL3Q8IZI9 196 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 DCAF4Q8WV16 495 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
SMAD3-206ENST00000558739 C16orf70Q9BSU1 422 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMAD3-206ENST00000558739 RWDD3Q9Y3V2 267 aa13.99□□□□□ -0.17
SMAD3-206ENST00000558739 C17orf102A2RUQ5 167 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 PPFIA3O75145 1194 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 ASGR2P07307 311 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 GHRP10912 638 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 PAN2Q504Q3 1202 aaKnown RBP13.98□□□□□ -0.17
SMAD3-206ENST00000558739 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
SMAD3-206ENST00000558739 SYTL5Q8TDW5 730 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-206ENST00000558739 ATP8B4Q8TF62 1192 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 LINC01599Q8WXQ3 324 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 PPP2R3CQ969Q6 453 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 SEC62Q99442 399 aaKnown RBP13.98□□□□□ -0.17
SMAD3-206ENST00000558739 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 S1PR5Q9H228 398 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 MRVI1Q9Y6F6 885 aa13.98□□□□□ -0.17
SMAD3-206ENST00000558739 IGF2RP11717 2491 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 PI15O43692 258 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 EIF2AK2P19525 551 aaKnown RBP13.97□□□□□ -0.17
SMAD3-206ENST00000558739 CTDSPL2Q05D32 466 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 ZSCAN25Q6NSZ9 544 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 SIRT2Q8IXJ6 389 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 APPBP2Q92624 585 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 P2RX5Q93086 422 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms