RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 KIAA0753Q2KHM9 967 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 SEPT14Q6ZU15 432 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 FIBCD1Q8N539 461 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 KBTBD3Q8NAB2 608 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 SEPT8Q92599 483 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 MSLNLQ96KJ4 702 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 C11orf84Q9BUA3 381 aaPredicted RBP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 KATNAL1Q9BW62 490 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 IFIH1Q9BYX4 1025 aaKnown RBP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 IGFLR1Q9H665 355 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 PNMA2Q9UL42 364 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 MTMR7Q9Y216 660 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.96□□□□□ -1.14
LRRC28-207ENST00000558500 EPG5Q9HCE0 2579 aa7.96□□□□□ -1.14
LRRC28-207ENST00000558500 COL4A6Q14031 1691 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 SIP14410 1827 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 TSPY2A6NKD2 308 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 H0Y858 1186 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 M0R2C6 588 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 SNPHO15079 494 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 RNF113AO15541 343 aaKnown RBP7.95□□□□□ -1.14
LRRC28-207ENST00000558500 HMMRO75330 724 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 LINC00271P0C7V0 271 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 ZNF286BP0CG31 522 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 NOVP48745 357 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 PPARAQ07869 468 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 TMEM92Q6UXU6 159 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 ASCL5Q7RTU5 278 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 SERINC5Q86VE9 423 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 SIRT2Q8IXJ6 389 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 RGS22Q8NE09 1264 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 EMID1Q96A84 441 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-207ENST00000558500 IL17RAQ96F46 866 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 ASIC4Q96FT7 647 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 DDX27Q96GQ7 796 aaKnown RBP7.95□□□□□ -1.14
LRRC28-207ENST00000558500 FSD1Q9BTV5 496 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 NACAP1Q9BZK3 213 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 TLR9Q9NR96 1032 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 DDX41Q9UJV9 622 aaKnown RBP7.95□□□□□ -1.14
LRRC28-207ENST00000558500 RWDD3Q9Y3V2 267 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 WDR19Q8NEZ3 1342 aa7.95□□□□□ -1.14
LRRC28-207ENST00000558500 PRR23AA6NEV1 266 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 MMP1P03956 469 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 ZFYP08048 801 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-207ENST00000558500 HOXD8P13378 290 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-207ENST00000558500 NDUFV1P49821 464 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 RRP1P56182 461 aaKnown RBP7.94□□□□□ -1.14
LRRC28-207ENST00000558500 LAMC2Q13753 1193 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 STXBP2Q15833 593 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 DHX37Q8IY37 1157 aaKnown RBP7.94□□□□□ -1.14
LRRC28-207ENST00000558500 SMRP1Q8NCR6 262 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 PPTC7Q8NI37 304 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 OSBPL7Q9BZF2 842 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 NAPBQ9H115 298 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 GPCPD1Q9NPB8 672 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 INCENPQ9NQS7 918 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 ECHDC1Q9NTX5 307 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 CLEC1BQ9P126 229 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 FRMPD2Q68DX3 1309 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-207ENST00000558500 NCOR2Q9Y618 2525 aa7.94□□□□□ -1.14
LRRC28-207ENST00000558500 LCTP09848 1927 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 C17orf102A2RUQ5 167 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 CAND2O75155 1236 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 PPFIA4O75335 1185 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 CTSHP09668 335 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 ICAM3P32942 547 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 NBL1P41271 181 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 ID4P47928 161 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 COASYQ13057 564 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 CAMK1Q14012 370 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 EFHBQ8N7U6 833 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 SYTL5Q8TDW5 730 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-207ENST00000558500 PANK1Q8TE04 598 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 NSUN6Q8TEA1 469 aaKnown RBP7.93□□□□□ -1.14
LRRC28-207ENST00000558500 APBB2Q92870 758 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 CLP1Q92989 425 aaKnown RBP7.93□□□□□ -1.14
LRRC28-207ENST00000558500 PPP2R3CQ969Q6 453 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 TAAR1Q96RJ0 339 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 IWS1Q96ST2 819 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 PHF7Q9BWX1 381 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-207ENST00000558500 MAF1Q9H063 256 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 RC3H2Q9HBD1 1191 aaKnown RBP7.93□□□□□ -1.14
LRRC28-207ENST00000558500 USP15Q9Y4E8 981 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-207ENST00000558500 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 FAM186AA6NE01 2351 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 ADGRA3Q8IWK6 1321 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 MYO7AQ13402 2215 aa7.93□□□□□ -1.14
LRRC28-207ENST00000558500 MYO15AQ9UKN7 3530 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 RANBP6O60518 1105 aaKnown RBP7.92□□□□□ -1.14
LRRC28-207ENST00000558500 KDM4AO75164 1064 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 CSPG5O95196 566 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 TOP1P11387 765 aaKnown RBP7.92□□□□□ -1.14
LRRC28-207ENST00000558500 HOXC8P31273 242 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 CTDSPL2Q05D32 466 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 PTPN21Q16825 1174 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 USH1GQ495M9 461 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 TBC1D5Q92609 795 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 ATP6V0A1Q93050 837 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 RPGRIP1Q96KN7 1286 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms