RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 AFG1LQ8WV93 481 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
TPM1-212ENST00000558347 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.74□□□□□ -0.538e-7■■■□□ 15.2
TPM1-212ENST00000558347 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
TPM1-212ENST00000558347 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
TPM1-212ENST00000558347 NAP1L2Q9ULW6 460 aaPredicted RBP11.74□□□□□ -0.53
TPM1-212ENST00000558347 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 MYH7BA7E2Y1 1941 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 hCG_1642624A0A1W2PR95 340 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 CTDNEP1O95476 244 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 MMP3P08254 477 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 GNAQP50148 359 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 FANCBQ8NB91 859 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
TPM1-212ENST00000558347 RNPC3Q96LT9 517 aaKnown RBP11.73□□□□□ -0.53
TPM1-212ENST00000558347 LZTS2Q9BRK4 669 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 NOC4LQ9BVI4 516 aaKnown RBP11.73□□□□□ -0.53
TPM1-212ENST00000558347 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
TPM1-212ENST00000558347 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
TPM1-212ENST00000558347 MYH15Q9Y2K3 1946 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 MEIS2O14770 477 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 CDKL5O76039 1030 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 ACRP10323 421 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 CYP2C9P11712 490 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 CDC27P30260 824 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 CCND2P30279 289 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 CCL23P55773 120 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 NTRK3Q16288 839 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 RTN1Q16799 776 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 TMEM240Q5SV17 173 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 CPLX2Q6PUV4 134 aaKnown RBP11.72□□□□□ -0.53
TPM1-212ENST00000558347 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 KAT2BQ92831 832 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 WNT8AQ9H1J5 351 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
TPM1-212ENST00000558347 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
TPM1-212ENST00000558347 SEC63Q9UGP8 760 aaKnown RBP11.72□□□□□ -0.53
TPM1-212ENST00000558347 CPLX1O14810 134 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 SORBS3O60504 671 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 KPNA6O60684 536 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 IFNAR1P17181 557 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
TPM1-212ENST00000558347 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.53
TPM1-212ENST00000558347 SP2Q02086 613 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.531e-7■■□□□ 14.5
TPM1-212ENST00000558347 FAM47CQ5HY64 1035 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
TPM1-212ENST00000558347 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
TPM1-212ENST00000558347 KIF3AQ9Y496 699 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 EYSQ5T1H1 3165 aa11.71□□□□□ -0.53
TPM1-212ENST00000558347 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.54
TPM1-212ENST00000558347 STK36Q9NRP7 1315 aa11.71□□□□□ -0.54
TPM1-212ENST00000558347 PIK3CDO00329 1044 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 JAK2O60674 1132 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 UBA1P22314 1058 aaKnown RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 CHMP4BP1P59074 171 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 KRT85P78386 507 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 SMAD3P84022 425 aaKnown RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 DGKDQ16760 1214 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 MYSM1Q5VVJ2 828 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 ZNF365Q70YC5 407 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 DHX37Q8IY37 1157 aaKnown RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 PPTC7Q8NI37 304 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 VWCEQ96DN2 955 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 SCLYQ96I15 445 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 FAM161BQ96MY7 647 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 BCAS3Q9H6U6 928 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 DOCK5Q9H7D0 1870 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 FIBPO43427 364 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 GGPS1O95749 300 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 SUPT20HL2P0C7V6 817 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 FDPSP14324 419 aaKnown RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 PTPN11Q06124 597 aaPredicted RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 FUT2Q10981 343 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 SEMA3FQ13275 785 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 LAMC2Q13753 1193 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 UBE2SQ16763 222 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 HSDL1Q3SXM5 330 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 CELF3Q5SZQ8 465 aaKnown RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 FAM109BQ6ICB4 259 aaPredicted RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 CUL5Q93034 780 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 GUCD1Q96NT3 240 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 INPP4AQ96PE3 977 aaPredicted RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
TPM1-212ENST00000558347 IL23AQ9NPF7 189 aa11.7□□□□□ -0.54
TPM1-212ENST00000558347 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms