RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LENG9Q96B70 501 aa29.01■■■□□ 2.23
SMAD6-202ENST00000557916 PDCP20941 246 aa29■■■□□ 2.23
SMAD6-202ENST00000557916 HSDL1Q3SXM5 330 aa29■■■□□ 2.23
SMAD6-202ENST00000557916 POLR3EQ9NVU0 708 aa29■■■□□ 2.23
SMAD6-202ENST00000557916 A0A1W2PQ45 241 aaPredicted RBP28.99■■■□□ 2.23
SMAD6-202ENST00000557916 A0A1W2PQY0 241 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 KIF28PB7ZC32 967 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 MMP3P08254 477 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 MYL3P08590 195 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 U2AF2P26368 475 aaKnown RBP eCLIP28.99■■■□□ 2.23
SMAD6-202ENST00000557916 Q4G0T1 1027 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 MCTP1Q6DN14 999 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 CXCL17Q6UXB2 119 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 NOSTRINQ8IVI9 506 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 MBOAT7Q96N66 472 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 UIMC1Q96RL1 719 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 NAP1L4Q99733 375 aaKnown RBP28.99■■■□□ 2.23
SMAD6-202ENST00000557916 SDF4Q9BRK5 362 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 ZNF577Q9BSK1 485 aa28.99■■■□□ 2.23
SMAD6-202ENST00000557916 IPO5O00410 1097 aaKnown RBP28.98■■■□□ 2.23
SMAD6-202ENST00000557916 NOP56O00567 594 aaKnown RBP28.98■■■□□ 2.23
SMAD6-202ENST00000557916 CCNT1O60563 726 aaKnown RBP28.98■■■□□ 2.23
SMAD6-202ENST00000557916 GCFC2P16383 781 aaKnown RBP28.98■■■□□ 2.23
SMAD6-202ENST00000557916 ITGB3BPQ13352 177 aaPredicted RBP28.98■■■□□ 2.23
SMAD6-202ENST00000557916 PPP4R3AQ6IN85 833 aa28.98■■■□□ 2.23
SMAD6-202ENST00000557916 GLT1D1Q96MS3 346 aa28.98■■■□□ 2.23
SMAD6-202ENST00000557916 DDX25Q9UHL0 483 aaKnown RBP28.98■■■□□ 2.23
SMAD6-202ENST00000557916 NFASCO94856 1347 aa28.97■■■□□ 2.23
SMAD6-202ENST00000557916 KPNA6O60684 536 aa28.97■■■□□ 2.23
SMAD6-202ENST00000557916 SP4Q02446 784 aa28.97■■■□□ 2.23
SMAD6-202ENST00000557916 DGKDQ16760 1214 aa28.97■■■□□ 2.23
SMAD6-202ENST00000557916 VTI1AQ96AJ9 217 aa28.97■■■□□ 2.23
SMAD6-202ENST00000557916 MSH4O15457 936 aa28.96■■■□□ 2.23
SMAD6-202ENST00000557916 CABYRO75952 493 aa28.96■■■□□ 2.23
SMAD6-202ENST00000557916 PURAQ00577 322 aaKnown RBP28.96■■■□□ 2.23
SMAD6-202ENST00000557916 JPH1Q9HDC5 661 aaPredicted RBP28.96■■■□□ 2.23
SMAD6-202ENST00000557916 STARD7Q9NQZ5 370 aa28.96■■■□□ 2.23
SMAD6-202ENST00000557916 PPFIA4O75335 1185 aa28.95■■■□□ 2.23
SMAD6-202ENST00000557916 SPRYD3Q8NCJ5 442 aa28.95■■■□□ 2.23
SMAD6-202ENST00000557916 GPR20Q99678 358 aa28.95■■■□□ 2.23
SMAD6-202ENST00000557916 TBC1D22BQ9NU19 505 aa28.95■■■□□ 2.23
SMAD6-202ENST00000557916 SLC9A2Q9UBY0 812 aa28.95■■■□□ 2.23
SMAD6-202ENST00000557916 TELO2Q9Y4R8 837 aa28.95■■■□□ 2.23
SMAD6-202ENST00000557916 MKI67P46013 3256 aaKnown RBP28.95■■■□□ 2.22
SMAD6-202ENST00000557916 ELP1O95163 1332 aa28.95■■■□□ 2.22
SMAD6-202ENST00000557916 DHX15O43143 795 aaKnown RBP28.94■■■□□ 2.22
SMAD6-202ENST00000557916 SLC37A4O43826 429 aa28.94■■■□□ 2.22
SMAD6-202ENST00000557916 HOXD8P13378 290 aaPredicted RBP28.94■■■□□ 2.22
SMAD6-202ENST00000557916 ATP2B1P20020 1258 aa28.94■■■□□ 2.22
SMAD6-202ENST00000557916 SYT1P21579 422 aa28.94■■■□□ 2.22
SMAD6-202ENST00000557916 ATN1P54259 1190 aaPredicted RBP28.94■■■□□ 2.22
SMAD6-202ENST00000557916 MTG1Q9BT17 334 aaPredicted RBP28.94■■■□□ 2.22
SMAD6-202ENST00000557916 HTATIP2Q9BUP3 242 aa28.94■■■□□ 2.22
SMAD6-202ENST00000557916 VPS37CA5D8V6 355 aaPredicted RBP28.94■■■□□ 2.22
SMAD6-202ENST00000557916 DDX39AO00148 427 aaKnown RBP28.94■■■□□ 2.22
SMAD6-202ENST00000557916 BECN1Q14457 450 aa28.94■■■□□ 2.22
SMAD6-202ENST00000557916 SLC39A5Q6ZMH5 540 aa28.94■■■□□ 2.22
SMAD6-202ENST00000557916 DOCK5Q9H7D0 1870 aa28.93■■■□□ 2.22
SMAD6-202ENST00000557916 SLC5A5Q92911 643 aa28.93■■■□□ 2.22
SMAD6-202ENST00000557916 NOL7Q9UMY1 257 aaKnown RBP28.93■■■□□ 2.22
SMAD6-202ENST00000557916 WNT7AO00755 349 aa28.92■■■□□ 2.22
SMAD6-202ENST00000557916 ETNPPLQ8TBG4 499 aa28.92■■■□□ 2.22
SMAD6-202ENST00000557916 SEPT1Q8WYJ6 367 aa28.92■■■□□ 2.22
SMAD6-202ENST00000557916 GSTTP1A0A1W2PQM5 241 aa28.91■■■□□ 2.22
SMAD6-202ENST00000557916 TRAPPC10P48553 1259 aa28.91■■■□□ 2.22
SMAD6-202ENST00000557916 PSMC6P62333 389 aa28.91■■■□□ 2.22
SMAD6-202ENST00000557916 LRRC26Q2I0M4 334 aa28.91■■■□□ 2.22
SMAD6-202ENST00000557916 GJA10Q969M2 543 aa28.91■■■□□ 2.22
SMAD6-202ENST00000557916 RIT2Q99578 217 aa28.91■■■□□ 2.22
SMAD6-202ENST00000557916 A0A0U1RQG5 324 aaPredicted RBP28.9■■■□□ 2.22
SMAD6-202ENST00000557916 GAS7O60861 476 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 ZNF286BP0CG31 522 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 TCF7P36402 384 aaPredicted RBP28.9■■■□□ 2.22
SMAD6-202ENST00000557916 ACTR2P61160 394 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 LRCH2Q5VUJ6 765 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 POTEDQ86YR6 584 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 KCNMB3Q9NPA1 279 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 TCEAL9Q9UHQ7 104 aa28.9■■■□□ 2.22
SMAD6-202ENST00000557916 MARCH6O60337 910 aa28.89■■■□□ 2.22
SMAD6-202ENST00000557916 CCNE2O96020 404 aa28.89■■■□□ 2.22
SMAD6-202ENST00000557916 LGALS2P05162 132 aa28.89■■■□□ 2.22
SMAD6-202ENST00000557916 ITGA7Q13683 1181 aa28.89■■■□□ 2.22
SMAD6-202ENST00000557916 UTP14CQ5TAP6 766 aaKnown RBP28.89■■■□□ 2.22
SMAD6-202ENST00000557916 KAT2BQ92831 832 aa28.89■■■□□ 2.22
SMAD6-202ENST00000557916 TEKT3Q9BXF9 490 aa28.89■■■□□ 2.22
SMAD6-202ENST00000557916 TBX3O15119 743 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 MCM7P33993 719 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 CHMP4BP1P59074 171 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 KRT76Q01546 638 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 MLLT1Q03111 559 aaPredicted RBP28.88■■■□□ 2.21
SMAD6-202ENST00000557916 SNX17Q15036 470 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 TTC38Q5R3I4 469 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 C1orf53Q5VUE5 145 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 FAM20AQ96MK3 541 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 C16orf70Q9BSU1 422 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 DNAH12Q6ZR08 3092 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 GRIN2DO15399 1336 aa28.88■■■□□ 2.21
SMAD6-202ENST00000557916 ARVCFO00192 962 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 STX6O43752 255 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 NEMFO60524 1076 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms