RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 TNRC18O15417 2968 aaPredicted RBP16.3■□□□□ 0.2
USP3-205ENST00000557884 NOP56O00567 594 aaKnown RBP16.29■□□□□ 0.2
USP3-205ENST00000557884 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 PSMC6P62333 389 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
USP3-205ENST00000557884 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
USP3-205ENST00000557884 HSDL1Q3SXM5 330 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 PPTC7Q8NI37 304 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 HTATIP2Q9BUP3 242 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
USP3-205ENST00000557884 H3BQV1 296 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 DDX39AO00148 427 aaKnown RBP16.28■□□□□ 0.2
USP3-205ENST00000557884 MAFGO15525 162 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 ZNF286BP0CG31 522 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
USP3-205ENST00000557884 SETQ01105 290 aaPredicted RBP16.28■□□□□ 0.2
USP3-205ENST00000557884 DGKDQ16760 1214 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 SLC39A5Q6ZMH5 540 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 GIMAP8Q8ND71 665 aaPredicted RBP16.28■□□□□ 0.2
USP3-205ENST00000557884 PPP1R13LQ8WUF5 828 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 DPF3Q92784 378 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 LENG9Q96B70 501 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 ZNF577Q9BSK1 485 aa16.28■□□□□ 0.2
USP3-205ENST00000557884 MTG1Q9BT17 334 aaPredicted RBP16.28■□□□□ 0.2
USP3-205ENST00000557884 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 IPO5O00410 1097 aaKnown RBP16.27■□□□□ 0.2
USP3-205ENST00000557884 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.2
USP3-205ENST00000557884 ATP2B1P20020 1258 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 RTP1P59025 263 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.2
USP3-205ENST00000557884 MCTP1Q6DN14 999 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 GJA10Q969M2 543 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 GPR20Q99678 358 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 SDF4Q9BRK5 362 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
USP3-205ENST00000557884 DDX25Q9UHL0 483 aaKnown RBP16.27■□□□□ 0.2
USP3-205ENST00000557884 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
USP3-205ENST00000557884 CYP3A7-CYP3A51PA0A087WV96 503 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 MSH4O15457 936 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 SLC37A4O43826 429 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 KPNA6O60684 536 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 CABYRO75952 493 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 CYP3A7P24462 503 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 TRIM60Q495X7 471 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
USP3-205ENST00000557884 C7orf61Q8IZ16 206 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 INTS4Q96HW7 963 aaKnown RBP16.26■□□□□ 0.19
USP3-205ENST00000557884 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
USP3-205ENST00000557884 SLC9A2Q9UBY0 812 aa16.26■□□□□ 0.19
USP3-205ENST00000557884 GRIN2DO15399 1336 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 NFASCO94856 1347 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 ELP1O95163 1332 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
USP3-205ENST00000557884 WNT7AO00755 349 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 EVI5O60447 810 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
USP3-205ENST00000557884 HOXD8P13378 290 aaPredicted RBP16.25■□□□□ 0.19
USP3-205ENST00000557884 ITGA7Q13683 1181 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 Q4G0T1 1027 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 MOXD1Q6UVY6 613 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 TRIM50Q86XT4 487 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 KAT2BQ92831 832 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 MBOAT7Q96N66 472 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 PCDH10Q9P2E7 1040 aa16.25■□□□□ 0.19
USP3-205ENST00000557884 KIAA1217Q5T5P2 1943 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 GSTTP1A0A1W2PQM5 241 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 VPS37CA5D8V6 355 aaPredicted RBP16.24■□□□□ 0.19
USP3-205ENST00000557884 DHX15O43143 795 aaKnown RBP16.24■□□□□ 0.19
USP3-205ENST00000557884 PPFIA4O75335 1185 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 CCNE2O96020 404 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 LGALS2P05162 132 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 HSP90AA1P07900 732 aaKnown RBP16.24■□□□□ 0.19
USP3-205ENST00000557884 GCFC2P16383 781 aaKnown RBP16.24■□□□□ 0.19
USP3-205ENST00000557884 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
USP3-205ENST00000557884 ACTR2P61160 394 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 TLE2Q04725 743 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 SNX17Q15036 470 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 FAM47CQ5HY64 1035 aa16.24■□□□□ 0.19
USP3-205ENST00000557884 ARVCFO00192 962 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 CHMP2AO43633 222 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 GAS7O60861 476 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 PSEN2P49810 448 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 MFSD10Q14728 455 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 LRCH2Q5VUJ6 765 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 PPP4R3AQ6IN85 833 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 ETNPPLQ8TBG4 499 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 SEPT1Q8WYJ6 367 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 SLC5A5Q92911 643 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 NAP1L4Q99733 375 aaKnown RBP16.23■□□□□ 0.19
USP3-205ENST00000557884 TBC1D22BQ9NU19 505 aa16.23■□□□□ 0.19
USP3-205ENST00000557884 MARCH6O60337 910 aa16.22■□□□□ 0.19
USP3-205ENST00000557884 F2P00734 622 aa16.22■□□□□ 0.19
USP3-205ENST00000557884 PDCP20941 246 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms