RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 JADE3Q92613 823 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 SGCZQ96LD1 299 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 MCMBPQ9BTE3 642 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
TDP1-217ENST00000557782 ARFGAP3Q9NP61 516 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 TOMM22Q9NS69 142 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 CLEC1BQ9P126 229 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 TMEFF2Q9UIK5 374 aaPredicted RBP4.64□□□□□ -1.67
TDP1-217ENST00000557782 LRCH1Q9Y2L9 728 aa4.64□□□□□ -1.67
TDP1-217ENST00000557782 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 hCG_1642624A0A1W2PR95 340 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 CFAP69A5D8W1 941 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 A6NNZ2 444 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 KDM1AO60341 852 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 PPFIA3O75145 1194 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 HIP1RO75146 1068 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 LDHCP07864 332 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 POU2F2P09086 479 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 FAM163BP0C2L3 166 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 MYBP10242 640 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 LCP1P13796 627 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 PLS3P13797 630 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 YBX3P16989 372 aaKnown RBP eCLIP4.63□□□□□ -1.67
TDP1-217ENST00000557782 PAMP19021 973 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 SLC9A1P19634 815 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 TPP2P29144 1249 aaPredicted RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 GEMIN4P57678 1058 aaKnown RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 LACTBP83111 547 aaPredicted RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 IRF9Q00978 393 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 NMIQ13287 307 aaPredicted RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 TRIM14Q14142 442 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 LLGL1Q15334 1064 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 KIAA0753Q2KHM9 967 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 DUSP27Q5VZP5 1158 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 FDX2Q6P4F2 183 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 DARS2Q6PI48 645 aaKnown RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 CRTC3Q6UUV7 619 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 C8orf86Q6ZUL3 223 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 FRMD7Q6ZUT3 714 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 SAPCD2Q86UD0 394 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 SKAP1Q86WV1 359 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 SPNS2Q8IVW8 549 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 ZZZ3Q8IYH5 903 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 KIAA1958Q8N8K9 716 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 C12orf50Q8NA57 414 aaPredicted RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 RCBTB1Q8NDN9 531 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 DEPTORQ8TB45 409 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 TMEM169Q96HH4 297 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 MPP4Q96JB8 637 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 MMP19Q99542 508 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 PLCD4Q9BRC7 762 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 DNAJC28Q9NX36 388 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 FBXO2Q9UK22 296 aaPredicted RBP4.63□□□□□ -1.67
TDP1-217ENST00000557782 ACTL7BQ9Y614 415 aa4.63□□□□□ -1.67
TDP1-217ENST00000557782 RASA4BC9J798 803 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 H3BML4 177 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 RASA4O43374 803 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 TIMM44O43615 452 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 ZNF500O60304 480 aaPredicted RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 TUSC2O75896 110 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 SLITRK5O94991 958 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 EPXP11678 715 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 IFNGR1P15260 489 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 AGXTP21549 392 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 CD40P25942 277 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 GTF2A2P52657 109 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 CACNB3P54284 484 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 SMAD3P84022 425 aaKnown RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 SEMA5AQ13591 1074 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 SIM2Q14190 667 aaPredicted RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 SMAD2Q15796 467 aaKnown RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 PRR16Q569H4 304 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 JAKMIP3Q5VZ66 844 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 EEF1DP3Q658K8 133 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 RCSD1Q6JBY9 416 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 ZNF280DQ6N043 979 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 ACAD11Q709F0 780 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 OVCH2Q7RTZ1 564 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 PTRH1Q86Y79 214 aaKnown RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 DENND1CQ8IV53 801 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 CCDC103Q8IW40 242 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 FAM9BQ8IZU0 186 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 TGFBRAP1Q8WUH2 860 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 SKA1Q96BD8 255 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 C1GALT1C1Q96EU7 318 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 CHAMP1Q96JM3 812 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 FCRL3Q96P31 734 aaPredicted RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 CRB3Q9BUF7 120 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 TMEM60Q9H2L4 133 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 PRDM10Q9NQV6 1147 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 PGAP2Q9UHJ9 254 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 KCNG1Q9UIX4 513 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 CBLCQ9ULV8 474 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 TPX2Q9ULW0 747 aaKnown RBP4.62□□□□□ -1.67
TDP1-217ENST00000557782 PCDHGB6Q9Y5F9 930 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 PCDHA2Q9Y5H9 948 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 PCDHA11Q9Y5I1 949 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 GPR45Q9Y5Y3 372 aa4.62□□□□□ -1.67
TDP1-217ENST00000557782 NPHP3-ACAD11A0A0J9YXS1 232 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 A0A0U1RQG5 324 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms