RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ABHD14A-ACY1A0A1B0GW23 586 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 MEIS2O14770 477 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-235ENST00000557740 EFCAB14O75071 495 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 SMIM10L2AP0DMW4 78 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 SMIM10L2BP0DMW5 78 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 SP4Q02446 784 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 SEMA3FQ13275 785 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 COL9A3Q14050 684 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-235ENST00000557740 GPNMBQ14956 572 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 TMTC3Q6ZXV5 915 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 EMSYQ7Z589 1322 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 SERINC5Q86VE9 423 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 ATP6V0A1Q93050 837 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 WNT8BQ93098 351 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 CERS4Q9HA82 394 aa16.83■□□□□ 0.28
SHMT2-235ENST00000557740 hCG_1642624A0A1W2PR95 340 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 THPOP40225 353 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 TAP1Q03518 808 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 IKBKEQ14164 716 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 HEATR3Q7Z4Q2 680 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 SGMS1Q86VZ5 419 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 SKAP1Q86WV1 359 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 FANCBQ8NB91 859 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-235ENST00000557740 ATXN2LQ8WWM7 1075 aaKnown RBP16.82■□□□□ 0.28
SHMT2-235ENST00000557740 ARNTL2Q8WYA1 636 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 GPR20Q99678 358 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-235ENST00000557740 BCAS3Q9H6U6 928 aa16.82■□□□□ 0.28
SHMT2-235ENST00000557740 TET1Q8NFU7 2136 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 RSPH10B2B2RC85 870 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 RSPH10BP0C881 870 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 GNAT1P11488 350 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 DEFB103AP81534 67 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 HIC1Q14526 733 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 UBE2SQ16763 222 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
SHMT2-235ENST00000557740 TRAF7Q6Q0C0 670 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 GPRASP2Q96D09 838 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 CDHR1Q96JP9 859 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
SHMT2-235ENST00000557740 CHD7Q9P2D1 2997 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 CDC45O75419 566 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 LGR5O75473 907 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 ARHGEF15O94989 841 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 HOXC8P31273 242 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 MBTPS1Q14703 1052 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 TCTN1Q2MV58 587 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 APOA5Q6Q788 366 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 TMCO2Q7Z6W1 182 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-235ENST00000557740 IL27Q8NEV9 243 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 RBM28Q9NW13 759 aaKnown RBP16.8■□□□□ 0.28
SHMT2-235ENST00000557740 TRIP12Q14669 1992 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-235ENST00000557740 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
SHMT2-235ENST00000557740 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
SHMT2-235ENST00000557740 RFXAPO00287 272 aa16.79■□□□□ 0.28
SHMT2-235ENST00000557740 TREHO43280 583 aa16.79■□□□□ 0.28
SHMT2-235ENST00000557740 CAND2O75155 1236 aa16.79■□□□□ 0.28
SHMT2-235ENST00000557740 MRPS5P82675 430 aaKnown RBP16.79■□□□□ 0.28
SHMT2-235ENST00000557740 SKIV2LQ15477 1246 aaKnown RBP16.79■□□□□ 0.28
SHMT2-235ENST00000557740 RNPEPQ9H4A4 650 aa16.79■□□□□ 0.28
SHMT2-235ENST00000557740 SETD4Q9NVD3 440 aa16.79■□□□□ 0.28
SHMT2-235ENST00000557740 CNTNAP5Q8WYK1 1306 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 LCHNA4D1U4 455 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 GJB5O95377 273 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 AMHP03971 560 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 CTSHP09668 335 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 NAPAP54920 295 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 ARHGAP4P98171 946 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 MTMR1Q13613 665 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 KRT32Q14532 448 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 RTN1Q16799 776 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 FAM117BQ6P1L5 589 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
SHMT2-235ENST00000557740 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 ASB2Q96Q27 587 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 RAD9AQ99638 391 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 PKD2L1Q9P0L9 805 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 PCDHA6Q9UN73 950 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 PCDHA8Q9Y5H6 950 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 MTCH2Q9Y6C9 303 aa16.78■□□□□ 0.28
SHMT2-235ENST00000557740 GOLGA8AA7E2F4 631 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 ZBTB43O43298 467 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 KCNA2P16389 499 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 ITGB5P18084 799 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-235ENST00000557740 WWC2Q6AWC2 1192 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 PPP1R18Q6NYC8 613 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 DBF4BQ8NFT6 615 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 LMBR1Q8WVP7 490 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 SEPT8Q92599 483 aa16.77■□□□□ 0.28
SHMT2-235ENST00000557740 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-235ENST00000557740 TELO2Q9Y4R8 837 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms