RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RRAGCQ9HB90 399 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
SHMT2-233ENST00000557529 KCNH7Q9NS40 1196 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 TBC1D22BQ9NU19 505 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 CYP39A1Q9NYL5 469 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 DNM3Q9UQ16 869 aa13.95□□□□□ -0.18
SHMT2-233ENST00000557529 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-233ENST00000557529 A0A0G2JMZ2 1700 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 PSMA7O14818 248 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 MAFGO15525 162 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 STAM2O75886 525 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 SPATA31C1P0DKV0 1188 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-233ENST00000557529 FANCCQ00597 558 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 PSMD2Q13200 908 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 MOGSQ13724 837 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 EPHA7Q15375 998 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 POTEGQ6S5H5 508 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 B3GNT9Q6UX72 402 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-233ENST00000557529 DDX12PQ92771 950 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 DHTKD1Q96HY7 919 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-233ENST00000557529 HSD17B14Q9BPX1 270 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 SPATC1LQ9H0A9 340 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 HSD3B7Q9H2F3 369 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 GBA2Q9HCG7 927 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-233ENST00000557529 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
SHMT2-233ENST00000557529 BTBD7Q9P203 1132 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 CTNND2Q9UQB3 1225 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
SHMT2-233ENST00000557529 E9PMD0 336 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 EML1O00423 815 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 SLC25A27O95847 323 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHMT2-233ENST00000557529 NR3C2P08235 984 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 ZNF18P17022 549 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 PRCPP42785 496 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-233ENST00000557529 GPBP1Q86WP2 473 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
SHMT2-233ENST00000557529 ANKRD35Q8N283 1001 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 C2orf69Q8N8R5 385 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 DNERQ8NFT8 737 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 GPRASP2Q96D09 838 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 IWS1Q96ST2 819 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 IFNKQ9P0W0 207 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
SHMT2-233ENST00000557529 CHMP2AO43633 222 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 EYA4O95677 639 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 SERPINC1P01008 464 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 CETPP11597 493 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 CDK11BP21127 795 aaKnown RBP13.92□□□□□ -0.18
SHMT2-233ENST00000557529 GJA5P36382 358 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 GTF2A2P52657 109 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 SLC12A3P55017 1021 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 GPAT2Q6NUI2 795 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.18
SHMT2-233ENST00000557529 DYMQ7RTS9 669 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 SYT2Q8N9I0 419 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-233ENST00000557529 SPC24Q8NBT2 197 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 DNAJC19Q96DA6 116 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-233ENST00000557529 CDHR1Q96JP9 859 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 MED15Q96RN5 788 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 UNC45AQ9H3U1 944 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
SHMT2-233ENST00000557529 BICDL2A1A5D9 508 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 TESPA1A2RU30 521 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 B4DLN1 442 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 DHX15O43143 795 aaKnown RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 KRT18P05783 430 aaKnown RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 ATP1A3P13637 1013 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 IDEP14735 1019 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 CYP11B2P19099 503 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 STX17P56962 302 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 UBASH3AP57075 661 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 SPAG1Q07617 926 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 MIER3Q7Z3K6 550 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 NOC3LQ8WTT2 800 aaKnown RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 DYDC2Q96IM9 177 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 INPP4AQ96PE3 977 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 NACC1Q96RE7 527 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 PAGR1Q9BTK6 254 aa13.91□□□□□ -0.18
SHMT2-233ENST00000557529 MOV10L1Q9BXT6 1211 aaKnown RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
SHMT2-233ENST00000557529 ESPNB1AK53 854 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 CNMDO75829 334 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 SLITRK3O94933 977 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms