RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	NEK4	P51957	841 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	ARHGAP4	P98171	946 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	NTRK3	Q16288	839 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	PTGIS	Q16647	500 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	KIAA0753	Q2KHM9	967 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	HSDL1	Q3SXM5	330 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	JAKMIP3	Q5VZ66	844 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	GPR153	Q6NV75	609 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	RNPC3	Q96LT9	517 aa	Known RBP	11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	MXRA8	Q9BRK3	442 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	ALG1	Q9BT22	464 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	AZI2	Q9H6S1	392 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	JPH1	Q9HDC5	661 aa	Predicted RBP	11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	UBIAD1	Q9Y5Z9	338 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	NFASC	O94856	1347 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519		H3BRB1	525 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	LGALS2	P05162	132 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	ACTN1	P12814	892 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	FXR1	P51114	621 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	AK2	P54819	239 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	SP2	Q02086	613 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	TRIM29	Q14134	588 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	PKN1	Q16512	942 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	TYW1B	Q6NUM6	668 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	SEPT1	Q8WYJ6	367 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	NOC4L	Q9BVI4	516 aa	Known RBP	11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	TRPV6	Q9H1D0	765 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	TUT1	Q9H6E5	874 aa	Known RBP	11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	TRMT13	Q9NUP7	481 aa	Known RBP	11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	VPS54	Q9P1Q0	977 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	GTF2IRD1	Q9UHL9	959 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	KAT6A	Q92794	2004 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	GRIN2D	O15399	1336 aa		11.09	□□□□□ -0.63
RPS29-208	ENST00000557519	C17orf102	A2RUQ5	167 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	SORBS3	O60504	671 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	RPLP2	P05387	115 aa	Known RBP	11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	CYP3A4	P08684	503 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	KCNA2	P16389	499 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	ITGB5	P18084	799 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	SP4	Q02446	784 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	SCRN1	Q12765	414 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	AFAP1L1	Q8TED9	768 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	KAT2B	Q92831	832 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	GLG1	Q92896	1179 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	ZFP91	Q96JP5	570 aa	Predicted RBP	11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	GPR20	Q99678	358 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	NAP1L4	Q99733	375 aa	Known RBP	11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	IL23A	Q9NPF7	189 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	KCNH7	Q9NS40	1196 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	TBC1D22B	Q9NU19	505 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	ERAP1	Q9NZ08	941 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	SLC9A2	Q9UBY0	812 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	TPCN1	Q9ULQ1	816 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	PCDHA4	Q9UN74	947 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	DOCK5	Q9H7D0	1870 aa		11.08	□□□□□ -0.64
RPS29-208	ENST00000557519	RANBP2	P49792	3224 aa	Known RBP	11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	TANC1	Q9C0D5	1861 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	HAS3	O00219	553 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	MEIS1	O00470	390 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	ST18	O60284	1047 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	CSF2RA	P15509	400 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	CYP2C18	P33260	490 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	TCF7	P36402	384 aa	Predicted RBP	11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	USP11	P51784	963 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	SEMA3F	Q13275	785 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	PTK7	Q13308	1070 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	C8orf34	Q49A92	452 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	UTP14C	Q5TAP6	766 aa	Known RBP	11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	FAM160B1	Q5W0V3	765 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	KRT25	Q7Z3Z0	450 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	PLA2G4D	Q86XP0	818 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	BLID	Q8IZY5	108 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	DAGLB	Q8NCG7	672 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	GTF3C6	Q969F1	213 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	PGBD1	Q96JS3	809 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	SMARCAD1	Q9H4L7	1026 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	TMEM260	Q9NX78	707 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	PKD2L1	Q9P0L9	805 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	ORC3	Q9UBD5	711 aa	Predicted RBP	11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	HDAC6	Q9UBN7	1215 aa		11.07	□□□□□ -0.64
RPS29-208	ENST00000557519	CCDC194	A0A1B0GVG4	234 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	CAND2	O75155	1236 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	FGB	P02675	491 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	CYP2C9	P11712	490 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	SLC26A2	P50443	739 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	CCL23	P55773	120 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	NONO	Q15233	471 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	RABEP1	Q15276	862 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	GDF6	Q6KF10	455 aa	Predicted RBP	11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	RSPH3	Q86UC2	560 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	ATP6V0A1	Q93050	837 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	LARP6	Q9BRS8	491 aa	Known RBP	11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	ZNF577	Q9BSK1	485 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	C16orf70	Q9BSU1	422 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	AGO4	Q9HCK5	861 aa	Known RBP	11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	LIMCH1	Q9UPQ0	1083 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	KIF3A	Q9Y496	699 aa		11.06	□□□□□ -0.64
RPS29-208	ENST00000557519	EMSY	Q7Z589	1322 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms