RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 HSDL1Q3SXM5 330 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 MFSD5Q6N075 450 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 CYFIP1Q7L576 1253 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 PLA2G4DQ86XP0 818 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 TDHQ8IZJ6 230 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 BLIDQ8IZY5 108 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 DAGLBQ8NCG7 672 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 LARP6Q9BRS8 491 aaKnown RBP8.94□□□□□ -0.98
PSEN1-222ENST00000557356 MTIF3Q9H2K0 278 aaKnown RBP8.94□□□□□ -0.98
PSEN1-222ENST00000557356 HIPK3Q9H422 1215 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 TUT1Q9H6E5 874 aaKnown RBP8.94□□□□□ -0.98
PSEN1-222ENST00000557356 AZI2Q9H6S1 392 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 KCNH7Q9NS40 1196 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 TBC1D22BQ9NU19 505 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 VPS54Q9P1Q0 977 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 TBX21Q9UL17 535 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 KIF3AQ9Y496 699 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 NFASCO94856 1347 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 FRMPD3Q5JV73 1810 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 MCM3APO60318 1980 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 TRIM43BA6NCK2 446 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 HAS3O00219 553 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 PITPNM1O00562 1244 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 B4GALT4O60513 344 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 F2P00734 622 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 PFKMP08237 780 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 CIITAP33076 1130 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 PSEN2P49810 448 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 SLC26A2P50443 739 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 CHMP4BP1P59074 171 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 HMGN5P82970 282 aaKnown RBP8.93□□□□□ -0.98
PSEN1-222ENST00000557356 MDM2Q00987 491 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-222ENST00000557356 FPGSQ05932 587 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 MFSD10Q14728 455 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 NONOQ15233 471 aaKnown RBP eCLIP8.93□□□□□ -0.98
PSEN1-222ENST00000557356 ME3Q16798 604 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 KIAA0753Q2KHM9 967 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 MOXD1Q6UVY6 613 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 KRT25Q7Z3Z0 450 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 CAGE1Q8TC20 777 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 BADQ92934 168 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 GTF3C6Q969F1 213 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 TRIM43Q96BQ3 446 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-222ENST00000557356 GPR20Q99678 358 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 ALG1Q9BT22 464 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 PRO3102Q9H379 93 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 SMARCAD1Q9H4L7 1026 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 JPH1Q9HDC5 661 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-222ENST00000557356 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 SLC9A2Q9UBY0 812 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 GTF2IRD1Q9UHL9 959 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 GRIN2DO15399 1336 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 PDE4DIPQ5VU43 2346 aa8.93□□□□□ -0.98
PSEN1-222ENST00000557356 CCDC194A0A1B0GVG4 234 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 IPO5O00410 1097 aaKnown RBP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 LGALS2P05162 132 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 GCFC2P16383 781 aaKnown RBP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 KCNA2P16389 499 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 RFC2P35250 354 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 TCF7P36402 384 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 SEMA3FQ13275 785 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 PTK7Q13308 1070 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 SAFBQ15424 915 aaKnown RBP eCLIP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 PTGISQ16647 500 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 LRIT3Q3SXY7 679 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 FAM43BQ6ZT52 329 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 SH3RF1Q7Z6J0 888 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 CRYGNQ8WXF5 182 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 KAT2BQ92831 832 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 GLG1Q92896 1179 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 C16orf70Q9BSU1 422 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 PHF20Q9BVI0 1012 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 TRPV6Q9H1D0 765 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 AGO4Q9HCK5 861 aaKnown RBP8.92□□□□□ -0.98
PSEN1-222ENST00000557356 TMEM260Q9NX78 707 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 LCTP09848 1927 aa8.92□□□□□ -0.98
PSEN1-222ENST00000557356 LRRC37A2A6NM11 1700 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 NRCAMQ92823 1304 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 C17orf102A2RUQ5 167 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 RRN3P2A6NIE6 340 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 ATP9AO75110 1047 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 CAND2O75155 1236 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 ARP10275 920 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 PTGS1P23219 599 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 KRT76Q01546 638 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 PRR16Q569H4 304 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 FAM160B1Q5W0V3 765 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 ZNF746Q6NUN9 644 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-222ENST00000557356 MIS18BP1Q6P0N0 1132 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 PSRC1Q6PGN9 363 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-222ENST00000557356 PLPPR4Q7Z2D5 763 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 RSPH3Q86UC2 560 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 SMAP1Q8IYB5 467 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-222ENST00000557356 NECAB1Q8N987 351 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 FAM184AQ8NB25 1140 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 TBCKQ8TEA7 893 aa8.91□□□□□ -0.98
PSEN1-222ENST00000557356 AFAP1L1Q8TED9 768 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms