RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 DDX41Q9UJV9 622 aaKnown RBP8.43□□□□□ -1.06
SCFD1-222ENST00000556768 NAP1L2Q9ULW6 460 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-222ENST00000556768 PARP14Q460N5 1801 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 SPDYE3A6NKU9 549 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 NOP56O00567 594 aaKnown RBP8.43□□□□□ -1.06
SCFD1-222ENST00000556768 ZBTB43O43298 467 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 FGBP02675 491 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 PTGS1P23219 599 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 PRSS12P56730 875 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 BFSP2Q13515 415 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 NEDD9Q14511 834 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 XRRA1Q6P2D8 792 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 CCDC155Q8N6L0 562 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 PPTC7Q8NI37 304 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 EMID1Q96A84 441 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-222ENST00000556768 PBXIP1Q96AQ6 731 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 SPATA33Q96N06 139 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 LRRC2Q9BYS8 371 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 EHMT1Q9H9B1 1298 aa8.43□□□□□ -1.06
SCFD1-222ENST00000556768 GRIN2DO15399 1336 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 SMCHD1A6NHR9 2005 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 OPLAHO14841 1288 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 ARIH2O95376 493 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 PFKMP08237 780 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 MMP3P08254 477 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 RXRAP19793 462 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 PSMA5P28066 241 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 CCL23P55773 120 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 ARHGAP1Q07960 439 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 Q7L0L9 218 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 NLRX1Q86UT6 975 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 SRBD1Q8N5C6 995 aaKnown RBP8.42□□□□□ -1.06
SCFD1-222ENST00000556768 GIMAP8Q8ND71 665 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-222ENST00000556768 CDHR1Q96JP9 859 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 NOC4LQ9BVI4 516 aaKnown RBP8.42□□□□□ -1.06
SCFD1-222ENST00000556768 IL23AQ9NPF7 189 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 TRMT13Q9NUP7 481 aaKnown RBP8.42□□□□□ -1.06
SCFD1-222ENST00000556768 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
SCFD1-222ENST00000556768 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
SCFD1-222ENST00000556768 AP1G2O75843 785 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 PLEKHA8P1O95397 391 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 GGPS1O95749 300 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 ACRP10323 421 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 ACTN1P12814 892 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 EPHB4P54760 987 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 PTGISQ16647 500 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 RTN1Q16799 776 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 TMEM240Q5SV17 173 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 CELF3Q5SZQ8 465 aaKnown RBP8.41□□□□□ -1.06
SCFD1-222ENST00000556768 FOXD4L5Q5VV16 416 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-222ENST00000556768 APOA5Q6Q788 366 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 ZNF365Q70YC5 407 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 HEATR3Q7Z4Q2 680 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 SKAP1Q86WV1 359 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 TEX2Q8IWB9 1127 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 CMTR1Q8N1G2 835 aaKnown RBP8.41□□□□□ -1.06
SCFD1-222ENST00000556768 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 FOXD4L4Q8WXT5 416 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-222ENST00000556768 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.41□□□□□ -1.061e-9■□□□□ 11.2
SCFD1-222ENST00000556768 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 GLT8D2Q9H1C3 349 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 MTMR10Q9NXD2 777 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 STXBP5LQ9Y2K9 1186 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 UNC80Q8N2C7 3258 aa8.41□□□□□ -1.06
SCFD1-222ENST00000556768 TMEM265A0A087WTH1 108 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 FIBPO43427 364 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 PARNO95453 639 aaKnown RBP8.4□□□□□ -1.06
SCFD1-222ENST00000556768 CYP2C9P11712 490 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 RFC2P35250 354 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 RCAN1P53805 252 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 EXOSC10Q01780 885 aaKnown RBP8.4□□□□□ -1.06
SCFD1-222ENST00000556768 AKAP17AQ02040 695 aaKnown RBP8.4□□□□□ -1.06
SCFD1-222ENST00000556768 KIAA0753Q2KHM9 967 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 BLOC1S2Q6QNY1 142 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 TMTC3Q6ZXV5 915 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 OTOP2Q7RTS6 562 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 CAGE1Q8TC20 777 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 FTOQ9C0B1 505 aaKnown RBP eCLIP8.4□□□□□ -1.06
SCFD1-222ENST00000556768 RTEL1Q9NZ71 1219 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 MSRAQ9UJ68 235 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 SLC4A7Q9Y6M7 1214 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 EYSQ5T1H1 3165 aa8.4□□□□□ -1.06
SCFD1-222ENST00000556768 KLF18A0A0U1RQI7 1052 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 GOLGA8AA7E2F4 631 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 GOLGA8BA8MQT2 603 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 ZBBXA8MT70 800 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 hCG_1984214I3L0E3 225 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 MAFGO15525 162 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 EPB41L2O43491 1005 aaKnown RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 EIF5BO60841 1220 aaKnown RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 BRD1O95696 1058 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 CENPBP07199 599 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms