RNA–Protein interactions for RNA: ENST00000556708.1

AC091078.3-201, humanhuman

TSL 2 BASIC

Gene AC091078.3, Length 2,284 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC091078.3-201ENST00000556708 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 TBX2Q13207 712 aaPredicted RBP12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 VGLL4Q14135 290 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 SYTL5Q8TDW5 730 aaPredicted RBP12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 FAM20AQ96MK3 541 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 WRAP73Q9P2S5 460 aaPredicted RBP12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 PTPRFP10586 1907 aa12.12□□□□□ -0.47
AC091078.3-201ENST00000556708 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 CYP11B2P19099 503 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 USP14P54578 494 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 AMPD3Q01432 767 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 ILDR2Q71H61 639 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 TRERF1Q96PN7 1200 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 EIF2AK1Q9BQI3 630 aaKnown RBP12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 RNF225M0QZC1 329 aaPredicted RBP12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 DSG3P32926 999 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 PBX1P40424 430 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 TMEM132BQ14DG7 1078 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 TCP11X2Q5H9J9 407 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 PIGOQ8TEQ8 1089 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 SLC5A5Q92911 643 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 CLMNQ96JQ2 1002 aa12.11□□□□□ -0.47
AC091078.3-201ENST00000556708 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 SLITRK3O94933 977 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 EIF2AK2P19525 551 aaKnown RBP12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 RPA1P27694 616 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 COASYQ13057 564 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 LRCH2Q5VUJ6 765 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 GPBP1Q86WP2 473 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 P2RX5Q93086 422 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 DYDC2Q96IM9 177 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 MXRA8Q9BRK3 442 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 R3HDMLQ9H3Y0 253 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 AS3MTQ9HBK9 375 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 LIMA1Q9UHB6 759 aaKnown RBP12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
AC091078.3-201ENST00000556708 PVALEFA0A1B0GWK0 134 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 LRRC10BA6NIK2 292 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 ZBED4O75132 1171 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 CCNE1P24864 410 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 TRAF1Q13077 416 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 NOL9Q5SY16 702 aaKnown RBP12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 TMEM139Q8IV31 216 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 TC2NQ8N9U0 490 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 DCPSQ96C86 337 aaKnown RBP12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 HSD17B14Q9BPX1 270 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 PANK4Q9NVE7 773 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 PAPPA2Q9BXP8 1791 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 KDM3AQ9Y4C1 1321 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 ERCC3P19447 782 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 GSDMDP57764 484 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 GHRHRQ02643 423 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 CNNM4Q6P4Q7 775 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 CPLX3Q8WVH0 158 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 KCNH7Q9NS40 1196 aa12.09□□□□□ -0.47
AC091078.3-201ENST00000556708 DOCK5Q9H7D0 1870 aa12.08□□□□□ -0.47
AC091078.3-201ENST00000556708 PSMA7O14818 248 aa12.08□□□□□ -0.48
AC091078.3-201ENST00000556708 DHX15O43143 795 aaKnown RBP12.08□□□□□ -0.48
AC091078.3-201ENST00000556708 ATP9AO75110 1047 aa12.08□□□□□ -0.48
AC091078.3-201ENST00000556708 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
AC091078.3-201ENST00000556708 GIT2Q14161 759 aa12.08□□□□□ -0.48
AC091078.3-201ENST00000556708 E4F1Q66K89 784 aaPredicted RBP12.08□□□□□ -0.48
AC091078.3-201ENST00000556708 SPECC1LQ69YQ0 1117 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms