RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 PPP1R13LQ8WUF5 828 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 TIFAQ96CG3 184 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 GUCD1Q96NT3 240 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 FTOQ9C0B1 505 aaKnown RBP eCLIP12.37□□□□□ -0.43
XRCC3-216ENST00000556682 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
XRCC3-216ENST00000556682 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 ZNF215Q9UL58 517 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-216ENST00000556682 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 LGALS2P05162 132 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 GNAT1P11488 350 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 CPA1P15085 419 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 SELPP16109 830 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 CDC27P30260 824 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 ADD1P35611 737 aaKnown RBP12.36□□□□□ -0.43
XRCC3-216ENST00000556682 FUT2Q10981 343 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 PTK7Q13308 1070 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 MTMR1Q13613 665 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 SLC17A8Q8NDX2 589 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 CDX2Q99626 313 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-216ENST00000556682 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 CXXC1Q9P0U4 656 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-216ENST00000556682 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 LAMA3Q16787 3333 aa12.36□□□□□ -0.43
XRCC3-216ENST00000556682 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 STXBP3O00186 592 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 EIF5BO60841 1220 aaKnown RBP12.35□□□□□ -0.43
XRCC3-216ENST00000556682 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
XRCC3-216ENST00000556682 MCTP2Q6DN12 878 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 GPR20Q99678 358 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
XRCC3-216ENST00000556682 JADE2Q9NQC1 790 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
XRCC3-216ENST00000556682 UBIAD1Q9Y5Z9 338 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
XRCC3-216ENST00000556682 SZT2Q5T011 3432 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 KIF28PB7ZC32 967 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
XRCC3-216ENST00000556682 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 CKBP12277 381 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 SCG2P13521 617 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 ATP2A2P16615 1042 aaKnown RBP12.34□□□□□ -0.43
XRCC3-216ENST00000556682 ITGB5P18084 799 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 GNA11P29992 359 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 ZNF76P36508 570 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 SP4Q02446 784 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 RBL2Q08999 1139 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
XRCC3-216ENST00000556682 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
XRCC3-216ENST00000556682 LRRC8DQ7L1W4 858 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 PHOSPHO2Q8TCD6 241 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 SEPT1Q8WYJ6 367 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
XRCC3-216ENST00000556682 ATP6V0A1Q93050 837 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 MXRA8Q9BRK3 442 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 SLC28A3Q9HAS3 691 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 C6orf50Q9HD87 102 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 KIAA1217Q5T5P2 1943 aa12.34□□□□□ -0.43
XRCC3-216ENST00000556682 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 FOSL2P15408 326 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 KCNA2P16389 499 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 PBX2P40425 430 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 KCNJ6P48051 423 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 EVCP57679 992 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 CEP55Q53EZ4 464 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 SLC9A7Q96T83 725 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 SDF4Q9BRK5 362 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 TM6SF1Q9BZW5 370 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 RNPEPQ9H4A4 650 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 PCDHA11Q9Y5I1 949 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 EMSYQ7Z589 1322 aa12.33□□□□□ -0.44
XRCC3-216ENST00000556682 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 CPLX1O14810 134 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 EFCAB14O75071 495 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 ATP9AO75110 1047 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 CAND2O75155 1236 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 PDIA3P30101 505 aaKnown RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 TCF7P36402 384 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 THPOP40225 353 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 ZNF200P98182 395 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 GRIN2CQ14957 1233 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 SERINC5Q86VE9 423 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms