RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
GABRB3-211ENST00000556636 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
GABRB3-211ENST00000556636 IGLV3-22A0A075B6J6 115 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 RAG1P15918 1043 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 PSEN2P49810 448 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 EPHB4P54760 987 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 NLRP5P59047 1200 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 PTPN11Q06124 597 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-211ENST00000556636 MTMR1Q13613 665 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 HIC1Q14526 733 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 MCTP2Q6DN12 878 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 SESTD1Q86VW0 696 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
GABRB3-211ENST00000556636 CCDC148Q8NFR7 591 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 CDHR1Q96JP9 859 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 LBHD1Q9BQE6 289 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-211ENST00000556636 EHMT1Q9H9B1 1298 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 STK36Q9NRP7 1315 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 LIMCH1Q9UPQ0 1083 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 SCN10AQ9Y5Y9 1956 aa12.24□□□□□ -0.45
GABRB3-211ENST00000556636 UMODL1Q5DID0 1318 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 A0A1W2PPC1 479 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 TLR3O15455 904 aaKnown RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 CDKL5O76039 1030 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 ZNF286BP0CG31 522 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 CYP2C9P11712 490 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 CIITAP33076 1130 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 ITGB3BPQ13352 177 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 MFSD5Q6N075 450 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 C16orf59Q7L2K0 433 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 NIPA1Q7RTP0 329 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 FAM177A1Q8N128 213 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 DAGLBQ8NCG7 672 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 GIMAP8Q8ND71 665 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 NSUN7Q8NE18 718 aaKnown RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 VWCEQ96DN2 955 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 PHF20Q9BVI0 1012 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 NOC4LQ9BVI4 516 aaKnown RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 UBE2OQ9C0C9 1292 aaKnown RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 ORC3Q9UBD5 711 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-211ENST00000556636 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 KCNJ14Q9UNX9 436 aa12.23□□□□□ -0.45
GABRB3-211ENST00000556636 DHX15O43143 795 aaKnown RBP12.22□□□□□ -0.45
GABRB3-211ENST00000556636 JAK2O60674 1132 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 LGALS2P05162 132 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 CYP2C18P33260 490 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 FXR1P51114 621 aaKnown RBP eCLIP12.22□□□□□ -0.45
GABRB3-211ENST00000556636 MFSD10Q14728 455 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 SHHQ15465 462 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 FAM47CQ5HY64 1035 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 GALNT17Q6IS24 598 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 TDHQ8IZJ6 230 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 LENG9Q96B70 501 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 PCYT2Q99447 389 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 GTF2IRD1Q9UHL9 959 aa12.22□□□□□ -0.45
GABRB3-211ENST00000556636 NFASCO94856 1347 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 H3BRB1 525 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 NOP56O00567 594 aaKnown RBP12.21□□□□□ -0.45
GABRB3-211ENST00000556636 ATG7O95352 703 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 HOXC8P31273 242 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 ZNF76P36508 570 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 USP11P51784 963 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 CHMP4BP1P59074 171 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 ZNF200P98182 395 aaPredicted RBP12.21□□□□□ -0.45
GABRB3-211ENST00000556636 SP4Q02446 784 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 C9orf50Q5SZB4 431 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 PLA2G4DQ86XP0 818 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 ALG1Q9BT22 464 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 PPP1R12CQ9BZL4 782 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 WNT8AQ9H1J5 351 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 HIPK3Q9H422 1215 aa12.21□□□□□ -0.45
GABRB3-211ENST00000556636 TUT1Q9H6E5 874 aaKnown RBP12.21□□□□□ -0.45
GABRB3-211ENST00000556636 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 CYP3A7-CYP3A51PA0A087WV96 503 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-211ENST00000556636 LGR5O75473 907 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 CCNE2O96020 404 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 CSF2RAP15509 400 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 CYP3A7P24462 503 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 TCF7P36402 384 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-211ENST00000556636 RABEP1Q15276 862 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 PTGISQ16647 500 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
GABRB3-211ENST00000556636 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
GABRB3-211ENST00000556636 UIMC1Q96RL1 719 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms