RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 SPTLC3Q9NUV7 552 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 NRXN2Q9P2S2 1712 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 SMTNL1A8MU46 457 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 IRS4O14654 1257 aaPredicted RBP7.04□□□□□ -1.28
CPSF2-205ENST00000556622 BBOX1O75936 387 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 ITGB5P18084 799 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 LMNB1P20700 586 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 NT5C2P49902 561 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 PTH1RQ03431 593 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 AP3B2Q13367 1082 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 SF3A1Q15459 793 aaKnown RBP7.04□□□□□ -1.28
CPSF2-205ENST00000556622 STX1AQ16623 288 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 CRY2Q49AN0 593 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 SARM1Q6SZW1 724 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 SPOCD1Q6ZMY3 1216 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 SYNE3Q6ZMZ3 975 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 RBM43Q6ZSC3 357 aaKnown RBP7.04□□□□□ -1.28
CPSF2-205ENST00000556622 BEND4Q6ZU67 534 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 CEP57L1Q8IYX8 460 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 ZBTB38Q8NAP3 1195 aaPredicted RBP7.04□□□□□ -1.28
CPSF2-205ENST00000556622 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC8Q9H0W5 538 aaPredicted RBP7.04□□□□□ -1.28
CPSF2-205ENST00000556622 PAG1Q9NWQ8 432 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 IMPACTQ9P2X3 320 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 RCOR1Q9UKL0 485 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 TPCN1Q9ULQ1 816 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 PPM1HQ9ULR3 514 aa7.04□□□□□ -1.28
CPSF2-205ENST00000556622 SCN7AQ01118 1682 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 BCORQ6W2J9 1755 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 A0A1W2PQD8 194 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 EYA2O00167 538 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 CPLX1O14810 134 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 RNF113AO15541 343 aaKnown RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 IGSF3O75054 1194 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 IGKV5-2P06315 115 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 BMP3P12645 472 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 GSTT1P30711 240 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 ZNF165P49910 485 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 FCGRTP55899 365 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 EVCP57679 992 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 TRIM29Q14134 588 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 PPP2R5BQ15173 497 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 POU4F3Q15319 338 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 ZNF124Q15973 351 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 MSMPQ1L6U9 139 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 FBLN7Q53RD9 439 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC93Q567U6 631 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 EAPPQ56P03 285 aaPredicted RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 TAF7LQ5H9L4 462 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 ZNF648Q5T619 568 aaPredicted RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 OLFM4Q6UX06 510 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 DTHD1Q6ZMT9 781 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 Q6ZUG5 572 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 FBXO33Q7Z6M2 555 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 RALYLQ86SE5 291 aaKnown RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 SMARCC2Q8TAQ2 1214 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 LEO1Q8WVC0 666 aaPredicted RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 MRFAP1L1Q96HT8 127 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 ZNF512BQ96KM6 892 aaPredicted RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 MFSD14AQ96MC6 490 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 MTA3Q9BTC8 594 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 FUCA2Q9BTY2 467 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 AGXT2Q9BYV1 514 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 TRIM5Q9C035 493 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 TAOK3Q9H2K8 898 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 C12orf49Q9H741 205 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 CACNA2D2Q9NY47 1150 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 ANGEL1Q9UNK9 670 aaKnown RBP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
CPSF2-205ENST00000556622 UTRNP46939 3433 aa7.03□□□□□ -1.28
CPSF2-205ENST00000556622 ANKRD31Q8N7Z5 1873 aa7.02□□□□□ -1.28
CPSF2-205ENST00000556622 KIAA1551Q9HCM1 1747 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 SLX4Q8IY92 1834 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 CBFA2T2O43439 604 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 YEATS4O95619 227 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 PCCAP05165 728 aaPredicted RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 CTSBP07858 339 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 IFIT1P09914 478 aaKnown RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 UQCRFS1P1P0C7P4 283 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 MAOBP27338 520 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 GNA15P30679 374 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 PREPP48147 710 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 TUBB4BP68371 445 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 FAM193AP78312 1265 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 FAM160A1Q05DH4 1040 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 TFCP2Q12800 502 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 SF3B3Q15393 1217 aaKnown RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 ADCK5Q3MIX3 580 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 TTC39AQ5SRH9 613 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 ADALQ6DHV7 355 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 GIMAP6Q6P9H5 292 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 UBE3BQ7Z3V4 1068 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 SP8Q8IXZ3 490 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 TMTC2Q8N394 836 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms