RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 MUTP22033 750 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 UBA1P22314 1058 aaKnown RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 SFNP31947 248 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 CYP2C19P33261 490 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 LONP1P36776 959 aaKnown RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 CACNB2Q08289 660 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 SPIRE1Q08AE8 756 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 NBR1Q14596 966 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 STK38Q15208 465 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 TMEM266Q2M3C6 531 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 METTL7BQ6UX53 244 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 SDF4Q9BRK5 362 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 TEKT3Q9BXF9 490 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 FBXO2Q9UK22 296 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 VAV3Q9UKW4 847 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 GNEQ9Y223 722 aaKnown RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 PTCH2Q9Y6C5 1203 aa12.72□□□□□ -0.37
FOXN3-212ENST00000556541 MYH9P35579 1960 aaKnown RBP12.72□□□□□ -0.37
FOXN3-212ENST00000556541 A0A1W2PQ27 194 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 A0A1W2PQ64 194 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 A0A1W2PQD8 194 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 GAS7O60861 476 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 CUTAO60888 179 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 ATG7O95352 703 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 GH1P01241 217 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 ATP2B1P20020 1258 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 JAK3P52333 1124 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 MLLT1Q03111 559 aaPredicted RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 CELF3Q5SZQ8 465 aaKnown RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 ADALQ6DHV7 355 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 SEPT14Q6ZU15 432 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 NEK9Q8TD19 979 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 ARMC5Q96C12 935 aa12.71□□□□□ -0.37
FOXN3-212ENST00000556541 UPF3AQ9H1J1 476 aaKnown RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
FOXN3-212ENST00000556541 FAM237AA0A1B0GTK4 181 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 CCDC85CA6NKD9 419 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 ATP9AO75110 1047 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 ARIH2O95376 493 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 INHAP05111 366 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
FOXN3-212ENST00000556541 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
FOXN3-212ENST00000556541 SP2Q02086 613 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 ARHGAP1Q07960 439 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
FOXN3-212ENST00000556541 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
FOXN3-212ENST00000556541 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
FOXN3-212ENST00000556541 SLC9A2Q9UBY0 812 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 TCEAL9Q9UHQ7 104 aa12.7□□□□□ -0.38
FOXN3-212ENST00000556541 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
FOXN3-212ENST00000556541 IGKV6D-21A0A0A0MT36 114 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 ELNP15502 786 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 SMPD1P17405 629 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-212ENST00000556541 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 GJA9P57773 515 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 EPHA7Q15375 998 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 IL17AQ16552 155 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 HYIQ5T013 277 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 HMX1Q9NP08 348 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-212ENST00000556541 PDGFCQ9NRA1 345 aa12.69□□□□□ -0.38
FOXN3-212ENST00000556541 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
FOXN3-212ENST00000556541 A6NJR5 290 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 GOLGA6L22H0YM25 854 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 MARCH6O60337 910 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 KPNA6O60684 536 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 DKC1O60832 514 aaKnown RBP eCLIP12.68□□□□□ -0.387e-30■■■■■ 69
FOXN3-212ENST00000556541 LYPLA2O95372 231 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 GGPS1O95749 300 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
FOXN3-212ENST00000556541 PTMSP20962 102 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 TXKP42681 527 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 HAUS3Q68CZ6 603 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 EEPD1Q7L9B9 569 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
FOXN3-212ENST00000556541 AFAP1L1Q8TED9 768 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 PYM1Q9BRP8 204 aaKnown RBP12.68□□□□□ -0.38
FOXN3-212ENST00000556541 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-212ENST00000556541 UNC45AQ9H3U1 944 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms