RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 PDZD8Q8NEN9 1154 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ENOX1Q8TC92 643 aaKnown RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ANP32BQ92688 251 aaKnown RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 EVI5LQ96CN4 794 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 EAF1Q96JC9 268 aaPredicted RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 DIRC2Q96SL1 478 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 CNNM2Q9H8M5 875 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 IL1RAPL2Q9NP60 686 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 IGSF5Q9NSI5 407 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ECHDC1Q9NTX5 307 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ADAMTSL3P82987 1691 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 C1orf167Q5SNV9 1468 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 KDM3BQ7LBC6 1761 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 DBX1A6NMT0 343 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 GRM8O00222 908 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 MBD3O95983 291 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 NCLP19338 710 aaKnown RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 POLR2BP30876 1174 aaKnown RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 TRHRP34981 398 aaPredicted RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 CCNFP41002 786 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 RAD51AP2Q09MP3 1159 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 NEXNQ0ZGT2 675 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 NBPF12Q5TAG4 269 aaPredicted RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 TSHZ3Q63HK5 1081 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF790Q6PG37 636 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 USP48Q86UV5 1035 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 UNC5CLQ8IV45 518 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 SLITRK4Q8IW52 837 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 IFNL2Q8IZJ0 200 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 ZGPATQ8N5A5 531 aaKnown RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 BHLHE22Q8NFJ8 381 aaPredicted RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 SYTL5Q8TDW5 730 aaPredicted RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 ZSCAN31Q96LW9 406 aaPredicted RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 TM6SF1Q9BZW5 370 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 LSG1Q9H089 658 aaKnown RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 NSUN3Q9H649 340 aaKnown RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 SLC52A2Q9HAB3 445 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 LIMCH1Q9UPQ0 1083 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 ZDHHC9Q9Y397 364 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.76□□□□□ -1.65
TGFB3-205ENST00000556507 KIF1AQ12756 1690 aa4.76□□□□□ -1.65
TGFB3-205ENST00000556507 RAD50Q92878 1312 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 WDR33Q9C0J8 1336 aaKnown RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SSU72P8A0A1W2PR75 194 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 FITM1A5D6W6 292 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 CLEC3AO75596 197 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 ANXA1P04083 346 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SNRPA1P09661 255 aaKnown RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 NME1P15531 152 aaKnown RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 PHKG2P15735 406 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 ZC3H6P61129 1189 aaKnown RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 FANCCQ00597 558 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 TEKQ02763 1124 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 CCDC173Q0VFZ6 552 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 DUSP4Q13115 394 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 PROSER3Q2NL68 480 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 NBPF9Q3BBW0 867 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 ZSCAN23Q3MJ62 389 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 CWC27Q6UX04 472 aaKnown RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SYDE1Q6ZW31 735 aaPredicted RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 GAS2L3Q86XJ1 694 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 TICAM2Q86XR7 235 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SPPL2CQ8IUH8 684 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 LILRA2Q8N149 483 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 DAGLBQ8NCG7 672 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 FBXO15Q8NCQ5 510 aaPredicted RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SYAP1Q96A49 352 aaPredicted RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 TRIM44Q96DX7 344 aaPredicted RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SUCLG2Q96I99 432 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 TTC14Q96N46 770 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 PPP1R9BQ96SB3 815 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 PPP1R16BQ96T49 567 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 HDAC8Q9BY41 377 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 METTL5Q9NRN9 209 aaKnown RBP4.75□□□□□ -1.65
TGFB3-205ENST00000556507 DIAPH3Q9NSV4 1193 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 PALD1Q9ULE6 856 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 ATP6V1DQ9Y5K8 247 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 SNX14Q9Y5W7 946 aa4.75□□□□□ -1.65
TGFB3-205ENST00000556507 NPHP3Q7Z494 1330 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 CAMTA1Q9Y6Y1 1673 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 DCCP43146 1447 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ABCC6O95255 1503 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 MEIS3P2A8K0S8 358 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 SASH1O94885 1247 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 LETM1O95202 739 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 MAP4K4O95819 1239 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ZKSCAN1P17029 563 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 RPL10P27635 214 aaKnown RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 PSMA5P28066 241 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 RAP1GAPP47736 663 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 NASPP49321 788 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 CHRNEQ04844 493 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 AIMP1Q12904 312 aaKnown RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 SNW1Q13573 536 aaKnown RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 PKP1Q13835 747 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 GCKRQ14397 625 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 NECTIN1Q15223 517 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF394Q53GI3 561 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms