RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 ATP9AO75110 1047 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 MYL1P05976 194 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 HAUS3Q68CZ6 603 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 ANKRD13CQ8N6S4 541 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 SHCBP1Q8NEM2 672 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 LARP4BQ92615 738 aaKnown RBP12.15□□□□□ -0.46
LINC01550-206ENST00000556462 RAD54LQ92698 747 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.46
LINC01550-206ENST00000556462 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 UNC45AQ9H3U1 944 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 KIAA1024Q9UPX6 916 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 MAFGO15525 162 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 SLITRK3O94933 977 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
LINC01550-206ENST00000556462 ALDH5A1P51649 535 aaPredicted RBP12.14□□□□□ -0.47
LINC01550-206ENST00000556462 MCM6Q14566 821 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 ERMNQ8TAM6 284 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 GPRASP2Q96D09 838 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 C7orf25Q9BPX7 421 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
LINC01550-206ENST00000556462 TEKT3Q9BXF9 490 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 RGL1Q9NZL6 768 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 LCTP09848 1927 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 E9PMD0 336 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 CHMP2AO43633 222 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 KLRC4O43908 158 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 STAM2O75886 525 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 RPN1P04843 607 aaKnown RBP12.14□□□□□ -0.47
LINC01550-206ENST00000556462 EDNRBP24530 442 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
LINC01550-206ENST00000556462 FGD4Q96M96 766 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 BPIFA3Q9BQP9 254 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
LINC01550-206ENST00000556462 TBC1D22BQ9NU19 505 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
LINC01550-206ENST00000556462 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
LINC01550-206ENST00000556462 MYMKA6NI61 221 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
LINC01550-206ENST00000556462 IGF2BP3O00425 579 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01550-206ENST00000556462 PGK2P07205 417 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 SLC10A3P09131 477 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 PSMC6P62333 389 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 AMPD3Q01432 767 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 DHX8Q14562 1220 aaKnown RBP12.13□□□□□ -0.47
LINC01550-206ENST00000556462 EPHA7Q15375 998 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 STXBP2Q15833 593 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
LINC01550-206ENST00000556462 MMP19Q99542 508 aa12.13□□□□□ -0.47
LINC01550-206ENST00000556462 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
LINC01550-206ENST00000556462 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
LINC01550-206ENST00000556462 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
LINC01550-206ENST00000556462 FCER1AP12319 257 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 CYP4A11Q02928 519 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 KCTD2Q14681 263 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 NLRX1Q86UT6 975 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 AP5Z1O43299 807 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 KCNA2P16389 499 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 CCNA1P78396 465 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
LINC01550-206ENST00000556462 KCNB1Q14721 858 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 NCAPHQ15003 741 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 WDR78Q5VTH9 848 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 BCAS3Q9H6U6 928 aa12.12□□□□□ -0.47
LINC01550-206ENST00000556462 WRAP73Q9P2S5 460 aaPredicted RBP12.12□□□□□ -0.47
LINC01550-206ENST00000556462 TOMM70O94826 608 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 RHOBTB3O94955 611 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 PLA2G4BP0C869 781 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
LINC01550-206ENST00000556462 ICAM3P32942 547 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 SLC12A3P55017 1021 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 INHBEP58166 350 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 FAM110CQ1W6H9 321 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 KMT5BQ4FZB7 885 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 SMYD4Q8IYR2 804 aaPredicted RBP12.11□□□□□ -0.47
LINC01550-206ENST00000556462 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 DDX12PQ92771 950 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 CDHR1Q96JP9 859 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 MED15Q96RN5 788 aa12.11□□□□□ -0.47
LINC01550-206ENST00000556462 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms