RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 hCG_1642624A0A1W2PR95 340 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 C17orf102A2RUQ5 167 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 WDR5P61964 334 aaKnown RBP26.01■■□□□ 1.75
ACTN1-220ENST00000556433 RNF20Q5VTR2 975 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 TRAF7Q6Q0C0 670 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 NLRX1Q86UT6 975 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 GPR20Q99678 358 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 CHD9Q3L8U1 2897 aa26.01■■□□□ 1.75
ACTN1-220ENST00000556433 RFXAPO00287 272 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 TLL1O43897 1013 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 SMIM10L2AP0DMW4 78 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 SMIM10L2BP0DMW5 78 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 TCTN1Q2MV58 587 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 TJAP1Q5JTD0 557 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 SYNE3Q6ZMZ3 975 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 SERINC5Q86VE9 423 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 ATP6V0A1Q93050 837 aa26■■□□□ 1.75
ACTN1-220ENST00000556433 ABHD14A-ACY1A0A1B0GW23 586 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 THPOP40225 353 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 TAP1Q03518 808 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 IKBKEQ14164 716 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 TMTC3Q6ZXV5 915 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 TMCO2Q7Z6W1 182 aaPredicted RBP25.99■■□□□ 1.75
ACTN1-220ENST00000556433 SGMS1Q86VZ5 419 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 MICALL1Q8N3F8 863 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 SENP7Q9BQF6 1050 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 ZBED2Q9BTP6 218 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 RNPEPQ9H4A4 650 aa25.99■■□□□ 1.75
ACTN1-220ENST00000556433 ARHGEF15O94989 841 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 DEFB103AP81534 67 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 SP4Q02446 784 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 MBTPS1Q14703 1052 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 UTP14CQ5TAP6 766 aaKnown RBP25.98■■□□□ 1.75
ACTN1-220ENST00000556433 MICU3Q86XE3 530 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 ATXN2LQ8WWM7 1075 aaKnown RBP25.98■■□□□ 1.75
ACTN1-220ENST00000556433 ARNTL2Q8WYA1 636 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 NEK1Q96PY6 1258 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 THEGQ9P2T0 379 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 TELO2Q9Y4R8 837 aa25.98■■□□□ 1.75
ACTN1-220ENST00000556433 RSPH10B2B2RC85 870 aa25.97■■□□□ 1.75
ACTN1-220ENST00000556433 RBAK-RBAKDNI3L0D1 243 aa25.97■■□□□ 1.75
ACTN1-220ENST00000556433 TREHO43280 583 aa25.97■■□□□ 1.75
ACTN1-220ENST00000556433 RSPH10BP0C881 870 aa25.97■■□□□ 1.75
ACTN1-220ENST00000556433 EPOPA6NHQ4 379 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 EFCAB14O75071 495 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 LGR5O75473 907 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 HOXC8P31273 242 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 UBE2SQ16763 222 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 HEATR3Q7Z4Q2 680 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 TRIM50Q86XT4 487 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 GIMAP8Q8ND71 665 aaPredicted RBP25.96■■□□□ 1.75
ACTN1-220ENST00000556433 SETD4Q9NVD3 440 aa25.96■■□□□ 1.75
ACTN1-220ENST00000556433 ZNF215Q9UL58 517 aaPredicted RBP25.96■■□□□ 1.75
ACTN1-220ENST00000556433 EMSYQ7Z589 1322 aa25.95■■□□□ 1.75
ACTN1-220ENST00000556433 SPDYE3A6NKU9 549 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 GTPBP6O43824 516 aaPredicted RBP25.95■■□□□ 1.74
ACTN1-220ENST00000556433 GNAT1P11488 350 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 GPRASP2Q96D09 838 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 CDHR1Q96JP9 859 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 TCEANC2Q96MN5 208 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 TSPYL2Q9H2G4 693 aaPredicted RBP25.95■■□□□ 1.74
ACTN1-220ENST00000556433 PCDHA6Q9UN73 950 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 PCDHA8Q9Y5H6 950 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 MTCH2Q9Y6C9 303 aa25.95■■□□□ 1.74
ACTN1-220ENST00000556433 LCHNA4D1U4 455 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 ATP9AO75110 1047 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 ITGB5P18084 799 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 POU3F3P20264 500 aaPredicted RBP25.94■■□□□ 1.74
ACTN1-220ENST00000556433 MRPS5P82675 430 aaKnown RBP25.94■■□□□ 1.74
ACTN1-220ENST00000556433 EXOSC10Q01780 885 aaKnown RBP25.94■■□□□ 1.74
ACTN1-220ENST00000556433 APOA5Q6Q788 366 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 DHX32Q7L7V1 743 aaKnown RBP25.94■■□□□ 1.74
ACTN1-220ENST00000556433 DBF4BQ8NFT6 615 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 ASB2Q96Q27 587 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 RAD9AQ99638 391 aa25.94■■□□□ 1.74
ACTN1-220ENST00000556433 RBM28Q9NW13 759 aaKnown RBP25.94■■□□□ 1.74
ACTN1-220ENST00000556433 GJB5O95377 273 aa25.93■■□□□ 1.74
ACTN1-220ENST00000556433 RASEFQ8IZ41 740 aa25.93■■□□□ 1.74
ACTN1-220ENST00000556433 BRPF3Q9ULD4 1205 aa25.93■■□□□ 1.74
ACTN1-220ENST00000556433 UBIAD1Q9Y5Z9 338 aa25.93■■□□□ 1.74
ACTN1-220ENST00000556433 CDC45O75419 566 aa25.92■■□□□ 1.74
ACTN1-220ENST00000556433 KCNA2P16389 499 aa25.92■■□□□ 1.74
ACTN1-220ENST00000556433 TSGA10IPQ3SY00 556 aa25.92■■□□□ 1.74
ACTN1-220ENST00000556433 FAM117BQ6P1L5 589 aa25.92■■□□□ 1.74
ACTN1-220ENST00000556433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.92■■□□□ 1.746e-6■□□□□ 8.2
ACTN1-220ENST00000556433 SPRED2Q7Z698 418 aa25.92■■□□□ 1.74
ACTN1-220ENST00000556433 CHD7Q9P2D1 2997 aa25.92■■□□□ 1.74
ACTN1-220ENST00000556433 TTC28Q96AY4 2481 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 ZBTB43O43298 467 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 CAND2O75155 1236 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 CTSHP09668 335 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 TCF7P36402 384 aaPredicted RBP25.91■■□□□ 1.74
ACTN1-220ENST00000556433 ARHGAP4P98171 946 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 MTMR1Q13613 665 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 SKIV2LQ15477 1246 aaKnown RBP25.91■■□□□ 1.74
ACTN1-220ENST00000556433 RTN1Q16799 776 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 ADCK5Q3MIX3 580 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 KRT40Q6A162 431 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 SEPT1Q8WYJ6 367 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 JADE2Q9NQC1 790 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms