RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PPP1R3GB7ZBB8 358 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 NF2P35240 595 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 EIF6P56537 245 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 GSDMDP57764 484 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 TMED1Q13445 227 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 GALNT17Q6IS24 598 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SYT10Q6XYQ8 523 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 HOMER1Q86YM7 354 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 PARP9Q8IXQ6 854 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 LRRC47Q8N1G4 583 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 CCDC148Q8NFR7 591 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 C7orf43Q8WVR3 580 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 GSDMAQ96QA5 445 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 IGSF5Q9NSI5 407 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 MRGBPQ9NV56 204 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 COMMD8Q9NX08 183 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 MYO3BQ8WXR4 1341 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 PPP1R11O60927 126 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 E2F6O75461 281 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF24P17028 368 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 LONP1P36776 959 aaKnown RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 PRPHP41219 470 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 TBX2Q13207 712 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 COL19A1Q14993 1142 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 KARSQ15046 597 aaKnown RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 DACT2Q5SW24 774 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 MICALCLQ6ZW33 695 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 TXLNBQ8N3L3 684 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 AGAP3Q96P47 875 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 BAG1Q99933 345 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 BLZF1Q9H2G9 400 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 USP40Q9NVE5 1235 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 EVLQ9UI08 416 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 PARP3Q9Y6F1 533 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 FRMPD2Q68DX3 1309 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 GOLGA6L10A6NI86 522 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CHRNA5P30532 468 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CRKP46108 304 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CACNB3P54284 484 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 TBX4P57082 545 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 TPM4P67936 248 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 GOLGA8FQ08AF8 430 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 GOLGA8DPQ0D2H9 430 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 KRT72Q14CN4 511 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 KBTBD12Q3ZCT8 623 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CFAP100Q494V2 611 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 COBLL1Q53SF7 1204 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CDKAL1Q5VV42 579 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 BTN2A1Q7KYR7 527 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 SH3BP5LQ7L8J4 393 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 PODNQ7Z5L7 613 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CCAR2Q8N163 923 aaKnown RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 FLAD1Q8NFF5 587 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 KIF18AQ8NI77 898 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 TATDN2Q93075 761 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 ZDHHC15Q96MV8 337 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 DISC1Q9NRI5 854 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 DDTLA6NHG4 134 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 SERPINC1P01008 464 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 PYGLP06737 847 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CYP11B2P19099 503 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 NAPAP54920 295 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 ZBED6P86452 979 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 DCLK2Q8N568 766 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 IQUBQ8NA54 791 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CCDC150Q8NCX0 1101 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 HPS3Q969F9 1004 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 SCYL1Q96KG9 808 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 PLEKHG4BQ96PX9 1271 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 CAPS2Q9BXY5 557 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 PDGFDQ9GZP0 370 aaPredicted RBP5.62□□□□□ -1.51
TMEM260-210ENST00000556422 FAM198AQ9UFP1 575 aa5.62□□□□□ -1.51
TMEM260-210ENST00000556422 A0A1B0GTH6 734 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 ESYT2A0FGR8 921 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 SMCO2A6NFE2 343 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 FAM196BA6NMK8 535 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 S100BP04271 92 aaPredicted RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 VIMP08670 466 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 SFPQP23246 707 aaKnown RBP eCLIP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 NEK10Q6ZWH5 1172 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 SDCCAG8Q86SQ7 713 aaPredicted RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 C2CD5Q86YS7 1000 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF710Q8N1W2 664 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 RRP36Q96EU6 259 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 SH3GL1Q99961 368 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 SENP7Q9BQF6 1050 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 PHACTR1Q9C0D0 580 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 MUC3BQ9H195 1237 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 EHD4Q9H223 541 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 FANCGO15287 622 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 CEP104O60308 925 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 ECE2O60344 883 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 MTA2O94776 668 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 TTLL1O95922 423 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 KCNJ6P48051 423 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF543Q08ER8 600 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 ZBTB17Q13105 803 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 NR1I3Q14994 352 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 RCN1Q15293 331 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms