RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 PGK1P00558 417 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 CALCRLQ16602 461 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 B3GNT9Q6UX72 402 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 UPF3AQ9H1J1 476 aaKnown RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 CHMP5Q9NZZ3 219 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 NFASCO94856 1347 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 TBX3O15119 743 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 GH1P01241 217 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 NKX3-2P78367 333 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 NEDD9Q14511 834 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 HSDL1Q3SXM5 330 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 TLK2Q86UE8 772 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 DHX37Q8IY37 1157 aaKnown RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 AFG1LQ8WV93 481 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 EMID1Q96A84 441 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 RIT2Q99578 217 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 Q9Y3F1 56 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 SYNRGQ9UMZ2 1314 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 DDX39AO00148 427 aaKnown RBP12.97□□□□□ -0.33
GABRB3-210ENST00000556166 NKRFO15226 690 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABRB3-210ENST00000556166 RARBP10826 455 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 TXKP42681 527 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 GJA9P57773 515 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 ATP2C1P98194 919 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-210ENST00000556166 BEX3Q00994 111 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 ORC2Q13416 577 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-210ENST00000556166 LAMC2Q13753 1193 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 CCSAPQ6IQ19 270 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-210ENST00000556166 METTL7BQ6UX53 244 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 OR6J1Q8NGC5 347 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 SPATA33Q96N06 139 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 MLXIPQ9HAP2 919 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 XPNPEP3Q9NQH7 507 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 TBC1D22BQ9NU19 505 aa12.97□□□□□ -0.33
GABRB3-210ENST00000556166 A6NJR5 290 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 EML1O00423 815 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 GJB1P08034 283 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 OR52Z1P0C646 297 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 NASPP49321 788 aaPredicted RBP12.96□□□□□ -0.33
GABRB3-210ENST00000556166 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
GABRB3-210ENST00000556166 SP4Q02446 784 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 SLC39A14Q15043 492 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 GPR20Q99678 358 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
GABRB3-210ENST00000556166 JPH1Q9HDC5 661 aaPredicted RBP12.96□□□□□ -0.33
GABRB3-210ENST00000556166 BRCA2P51587 3418 aa12.96□□□□□ -0.34
GABRB3-210ENST00000556166 MSCO60682 206 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 GAS7O60861 476 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 SGPL1O95470 568 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 ACTR2P61160 394 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 GRIN1Q05586 938 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 LRRC41Q15345 812 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
GABRB3-210ENST00000556166 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 GIMAP8Q8ND71 665 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-210ENST00000556166 PPTC7Q8NI37 304 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 U2AF1L4Q8WU68 220 aaKnown RBP12.95□□□□□ -0.34
GABRB3-210ENST00000556166 ZNF396Q96N95 335 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-210ENST00000556166 PCYT2Q99447 389 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 SDF4Q9BRK5 362 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 TTC12Q9H892 705 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-210ENST00000556166 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 SLC9A2Q9UBY0 812 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 OGDHLQ9ULD0 1010 aa12.95□□□□□ -0.34
GABRB3-210ENST00000556166 MARCH6O60337 910 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 ATG7O95352 703 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 C6orf222P0C671 652 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 HOXD8P13378 290 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 TECP42680 631 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 GJA8P48165 433 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 KCNA10Q16322 511 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 GNASQ5JWF2 1037 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 ABHD15Q6UXT9 468 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 TEKT3Q9BXF9 490 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 RCOR1Q9UKL0 485 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 PCDHA12Q9UN75 941 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 KIAA1217Q5T5P2 1943 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 CHMP2AO43633 222 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 MMP3P08254 477 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 PRPHP41219 470 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms