RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ARIH2O95376 493 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 TOP1P11387 765 aaKnown RBP6.83□□□□□ -1.32
PRKCH-220ENST00000556164 SELPP16109 830 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 MRPL12P52815 198 aaKnown RBP6.83□□□□□ -1.32
PRKCH-220ENST00000556164 RPS6P62753 249 aaKnown RBP6.83□□□□□ -1.32
PRKCH-220ENST00000556164 DEFB103AP81534 67 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 NR1H3Q13133 447 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 USH1GQ495M9 461 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-220ENST00000556164 GDF6Q6KF10 455 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-220ENST00000556164 CNKSR3Q6P9H4 555 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 BTNL9Q6UXG8 535 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 LRRC8DQ7L1W4 858 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 CHST3Q7LGC8 479 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 CAGE1Q8TC20 777 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 PI4K2BQ8TCG2 481 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 AFAP1L1Q8TED9 768 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 AFG1LQ8WV93 481 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 UBE2Q2Q8WVN8 375 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 CRBNQ96SW2 442 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 TMEM47Q9BQJ4 181 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 BACH2Q9BYV9 841 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 DCTPP1Q9H773 170 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 DCTN4Q9UJW0 460 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 RCAN3Q9UKA8 241 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 ATG2AQ2TAZ0 1938 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 KAT6AQ92794 2004 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 RALGAPA2Q2PPJ7 1873 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 PI4K2BG5E9Z4 385 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 ORC4O43929 436 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 GH1P01241 217 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 MMP3P08254 477 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 PDHBP11177 359 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 KCNA5P22460 613 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 EDNRBP24530 442 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 NOVP48745 357 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 GPNMBQ14956 572 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 LY6KQ17RY6 165 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 VPS53Q5VIR6 699 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 FAM117BQ6P1L5 589 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 TMEM92Q6UXU6 159 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 ZNF662Q6ZS27 426 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 SEPT14Q6ZU15 432 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 DNERQ8NFT8 737 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 OTUD7AQ8TE49 926 aaPredicted RBP6.82□□□□□ -1.32
PRKCH-220ENST00000556164 DHX38Q92620 1227 aaKnown RBP6.82□□□□□ -1.32
PRKCH-220ENST00000556164 UIMC1Q96RL1 719 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 TGS1Q96RS0 853 aaKnown RBP6.82□□□□□ -1.32
PRKCH-220ENST00000556164 LNPKQ9C0E8 428 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 UBE2ZQ9H832 354 aaPredicted RBP6.82□□□□□ -1.32
PRKCH-220ENST00000556164 SUGCTQ9HAC7 445 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
PRKCH-220ENST00000556164 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 BMP2KQ9NSY1 1161 aaPredicted RBP6.82□□□□□ -1.32
PRKCH-220ENST00000556164 LMCD1Q9NZU5 365 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 ANAPC4Q9UJX5 808 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 PNMA2Q9UL42 364 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 MUC6Q6W4X9 2439 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 LAMA4Q16363 1823 aa6.82□□□□□ -1.32
PRKCH-220ENST00000556164 DOCK5Q9H7D0 1870 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 WDR19Q8NEZ3 1342 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ABHD14A-ACY1A0A1B0GW23 586 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 LINC01553A4QN01 128 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ICMTO60725 284 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 NBNO60934 754 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 EFCAB14O75071 495 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 GJB5O95377 273 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 PARNO95453 639 aaKnown RBP6.81□□□□□ -1.32
PRKCH-220ENST00000556164 CXCL10P02778 98 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 CKBP12277 381 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 MX1P20591 662 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 CASTP20810 708 aaKnown RBP6.81□□□□□ -1.32
PRKCH-220ENST00000556164 HAND2P61296 217 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ERVK-21P61565 698 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 TAGLNQ01995 201 aaKnown RBP6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ARHGAP1Q07960 439 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ZNF543Q08ER8 600 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 RAD51AP2Q09MP3 1159 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 IKBKEQ14164 716 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 TCTN1Q2MV58 587 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 PTCRAQ6ISU1 281 aaPredicted RBP6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
PRKCH-220ENST00000556164 SESTD1Q86VW0 696 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ANKMY2Q8IV38 441 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 GJD3Q8N144 294 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 C7orf31Q8N865 590 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 MICAL1Q8TDZ2 1067 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 KAT2BQ92831 832 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 CTAGE1Q96RT6 745 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 RAD9AQ99638 391 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 ALG1Q9BT22 464 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 CPVLQ9H3G5 476 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 OCEL1Q9H607 264 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 HDAC6Q9UBN7 1215 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 GTF2IRD1Q9UHL9 959 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
PRKCH-220ENST00000556164 MYO7AQ13402 2215 aa6.8□□□□□ -1.32
PRKCH-220ENST00000556164 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms