RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 RNF26Q9BY78 433 aaPredicted RBP12.7□□□□□ -0.38
CHGA-205ENST00000556098 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
CHGA-205ENST00000556098 PRR12Q9ULL5 1215 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 FRMPD2Q68DX3 1309 aaPredicted RBP12.69□□□□□ -0.38
CHGA-205ENST00000556098 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 JAK2O60674 1132 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 IQCF3P0C7M6 154 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 FDX1P10109 184 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 XBP1P17861 261 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 KIF5BP33176 963 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 SLC16A2P36021 539 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 GNAQP50148 359 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 UBE2HP62256 183 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 NKX3-2P78367 333 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 PURAQ00577 322 aaKnown RBP12.69□□□□□ -0.38
CHGA-205ENST00000556098 PDE4DQ08499 809 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 BAATQ14032 418 aaPredicted RBP12.69□□□□□ -0.38
CHGA-205ENST00000556098 TRIM29Q14134 588 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
CHGA-205ENST00000556098 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 ENAHQ8N8S7 591 aaPredicted RBP12.69□□□□□ -0.38
CHGA-205ENST00000556098 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 COPS5Q92905 334 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 MKL1Q969V6 931 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 ZNF396Q96N95 335 aaPredicted RBP12.69□□□□□ -0.38
CHGA-205ENST00000556098 SEZ6LQ9BYH1 1024 aa12.69□□□□□ -0.38
CHGA-205ENST00000556098 RALGAPA2Q2PPJ7 1873 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 NMT2O60551 498 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 DEXIO95424 95 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 RFC2P35250 354 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 SSRP1Q08945 709 aaKnown RBP12.68□□□□□ -0.38
CHGA-205ENST00000556098 NTRK3Q16288 839 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 SLC30A10Q6XR72 485 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 FANCBQ8NB91 859 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 FBXO18Q8NFZ0 1043 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
CHGA-205ENST00000556098 NCOA5Q9HCD5 579 aaKnown RBP12.68□□□□□ -0.38
CHGA-205ENST00000556098 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
CHGA-205ENST00000556098 Q9Y3F1 56 aa12.68□□□□□ -0.38
CHGA-205ENST00000556098 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 NFIBO00712 420 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 DEFB103AP81534 67 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
CHGA-205ENST00000556098 RESTQ13127 1097 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 BFSP2Q13515 415 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
CHGA-205ENST00000556098 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
CHGA-205ENST00000556098 FDPSP14324 419 aaKnown RBP12.66□□□□□ -0.38
CHGA-205ENST00000556098 KCNA5P22460 613 aa12.66□□□□□ -0.38
CHGA-205ENST00000556098 PTGISQ16647 500 aa12.66□□□□□ -0.38
CHGA-205ENST00000556098 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
CHGA-205ENST00000556098 MPHOSPH6Q99547 160 aaKnown RBP12.66□□□□□ -0.38
CHGA-205ENST00000556098 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
CHGA-205ENST00000556098 CD320Q9NPF0 282 aa12.66□□□□□ -0.38
CHGA-205ENST00000556098 C11orf16Q9NQ32 467 aa12.66□□□□□ -0.38
CHGA-205ENST00000556098 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
CHGA-205ENST00000556098 ICAM1P05362 532 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
CHGA-205ENST00000556098 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 NOVP48745 357 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 WDR5P61964 334 aaKnown RBP12.65□□□□□ -0.38
CHGA-205ENST00000556098 TROAPQ12815 778 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHGA-205ENST00000556098 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
CHGA-205ENST00000556098 SYDE2Q5VT97 1194 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 UBE2ZQ9H832 354 aaPredicted RBP12.65□□□□□ -0.38
CHGA-205ENST00000556098 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
CHGA-205ENST00000556098 SYNPO2Q9UMS6 1093 aa12.65□□□□□ -0.38
CHGA-205ENST00000556098 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.39
CHGA-205ENST00000556098 LOXHD1Q8IVV2 1947 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
CHGA-205ENST00000556098 SORBS3O60504 671 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 LPXNO60711 386 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 GPR37L1O60883 481 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 BAIAP3O94812 1187 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 IL9P15248 144 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 POU3F3P20264 500 aaPredicted RBP12.64□□□□□ -0.39
CHGA-205ENST00000556098 CDC27P30260 824 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
CHGA-205ENST00000556098 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
CHGA-205ENST00000556098 USH1GQ495M9 461 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
CHGA-205ENST00000556098 NFRKBQ6P4R8 1299 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 LRRC8DQ7L1W4 858 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
CHGA-205ENST00000556098 KIAA1671Q9BY89 1806 aa12.64□□□□□ -0.39
CHGA-205ENST00000556098 PI4K2BG5E9Z4 385 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 CSPG5O95196 566 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms