RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 PPP1R18Q6NYC8 613 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 HOMER1Q86YM7 354 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 USP38Q8NB14 1042 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 TIFAQ96CG3 184 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 SCLYQ96I15 445 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 NOC4LQ9BVI4 516 aaKnown RBP7.78□□□□□ -1.16
PSEN1-216ENST00000556066 AMNQ9BXJ7 453 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 SEZ6LQ9BYH1 1024 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 MTIF3Q9H2K0 278 aaKnown RBP7.78□□□□□ -1.16
PSEN1-216ENST00000556066 ZNF576Q9H609 170 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.78□□□□□ -1.16
PSEN1-216ENST00000556066 COL20A1Q9P218 1284 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 NOD1Q9Y239 953 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 TET1Q8NFU7 2136 aa7.78□□□□□ -1.16
PSEN1-216ENST00000556066 TANC1Q9C0D5 1861 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 TMEM265A0A087WTH1 108 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 A6NJR5 290 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 ZBBXA8MT70 800 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 KPNA6O60684 536 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 GH1P01241 217 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 CYP21A2P08686 494 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 MYCLP12524 364 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-216ENST00000556066 WTAPQ15007 396 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 SART3Q15020 963 aaKnown RBP7.77□□□□□ -1.17
PSEN1-216ENST00000556066 SEC23AQ15436 765 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 TJAP1Q5JTD0 557 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 ERICH6BQ5W0A0 696 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 DEFB128Q7Z7B8 93 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 RPUSD2Q8IZ73 545 aaKnown RBP7.77□□□□□ -1.17
PSEN1-216ENST00000556066 NCOA7Q8NI08 942 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 AFG1LQ8WV93 481 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 PIBF1Q8WXW3 757 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 HERVK_113Q902F9 699 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 IWS1Q96ST2 819 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 PBX4Q9BYU1 374 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 WNT8AQ9H1J5 351 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 CXXC1Q9P0U4 656 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-216ENST00000556066 MAD2L2Q9UI95 211 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 MSRAQ9UJ68 235 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 PCDHA1Q9Y5I3 950 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 TAF6LQ9Y6J9 622 aa7.77□□□□□ -1.17
PSEN1-216ENST00000556066 PALM3A6NDB9 673 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-216ENST00000556066 E7EWF7 191 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 LCE2BO14633 110 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 ZBTB5O15062 677 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 SGSM2O43147 1006 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 SORBS3O60504 671 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 PPP1R11O60927 126 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-216ENST00000556066 NR3C2P08235 984 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 MMP3P08254 477 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 HOXA13P31271 388 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-216ENST00000556066 TMEM67Q5HYA8 995 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 RASIP1Q5U651 963 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 PPM1EQ8WY54 764 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 PIGSQ96S52 555 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 MTRQ99707 1265 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 NKX2-4Q9H2Z4 354 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 SENP2Q9HC62 589 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 PXMP2Q9NR77 195 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 MRVI1Q9Y6F6 885 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 SLC4A7Q9Y6M7 1214 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 KAT6AQ92794 2004 aa7.76□□□□□ -1.17
PSEN1-216ENST00000556066 GCOM1H8Y6P7 765 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 TNFRSF10AO00220 468 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 OPLAHO14841 1288 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 EIF3JO75822 258 aaKnown RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 POLR2MP0CAP2 368 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 CASTP20810 708 aaKnown RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 HSD17B4P51659 736 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 RABGGTBP53611 331 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 ARHGAP1Q07960 439 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 GRM4Q14833 912 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 RAB30Q15771 203 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 PTGISQ16647 500 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 DGKDQ16760 1214 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 NFRKBQ6P4R8 1299 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 STOX1Q6ZVD7 989 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 CATIPQ7Z7H3 387 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 FCHSD1Q86WN1 690 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 DHX37Q8IY37 1157 aaKnown RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 SYMPKQ92797 1274 aaKnown RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 GAS2L1Q99501 681 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 FTOQ9C0B1 505 aaKnown RBP eCLIP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 MAF1Q9H063 256 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 PRDM12Q9H4Q4 367 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 SLC28A3Q9HAS3 691 aa7.75□□□□□ -1.17
PSEN1-216ENST00000556066 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 RBM8AQ9Y5S9 174 aaKnown RBP7.75□□□□□ -1.17
PSEN1-216ENST00000556066 CHD7Q9P2D1 2997 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PNMA6FA0A0J9YX94 578 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 CYTH3O43739 400 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PFKMP08237 780 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 IQCF3P0C7M6 154 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 ZNF286BP0CG31 522 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms