RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ICAM3P32942 547 aa16.66■□□□□ 0.26
CHMP4BP1-201ENST00000556017 IKBKEQ14164 716 aa16.66■□□□□ 0.26
CHMP4BP1-201ENST00000556017 KCNV1Q6PIU1 500 aa16.66■□□□□ 0.26
CHMP4BP1-201ENST00000556017 TGS1Q96RS0 853 aaKnown RBP16.66■□□□□ 0.26
CHMP4BP1-201ENST00000556017 ZBED2Q9BTP6 218 aa16.66■□□□□ 0.26
CHMP4BP1-201ENST00000556017 KAT6AQ92794 2004 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 RALGAPA2Q2PPJ7 1873 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 PNMA6FA0A0J9YX94 578 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 SPATA31C2B4DYI2 1134 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 H3BRB1 525 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 EFCAB14O75071 495 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 LGALS2P05162 132 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 SMIM10L2AP0DMW4 78 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 SMIM10L2BP0DMW5 78 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 CCND2P30279 289 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 FCHSD1Q86WN1 690 aa16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 TUT1Q9H6E5 874 aaKnown RBP16.65■□□□□ 0.26
CHMP4BP1-201ENST00000556017 RSPH10B2B2RC85 870 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 E7EWF7 191 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 RSPH10BP0C881 870 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 POLR2MP0CAP2 368 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 CHMLP26374 656 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 THPOP40225 353 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 IGDCC4Q8TDY8 1250 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 EMSYQ7Z589 1322 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 TRIOO75962 3097 aa16.64■□□□□ 0.25
CHMP4BP1-201ENST00000556017 C17orf102A2RUQ5 167 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 LINC00271P0C7V0 271 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 GPR20Q99678 358 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 C1QTNF1Q9BXJ1 281 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 UBE2ZQ9H832 354 aaPredicted RBP16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 SETD4Q9NVD3 440 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 INSL6Q9Y581 213 aa16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MEIS2O14770 477 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 PLA2G5P39877 138 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 METTL7BQ6UX53 244 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 CYFIP1Q7L576 1253 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MB21D2Q8IYB1 491 aaPredicted RBP16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 TOP1MTQ969P6 601 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 RTEL1Q9NZ71 1219 aa16.62■□□□□ 0.25
CHMP4BP1-201ENST00000556017 LOXHD1Q8IVV2 1947 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 SGSM2O43147 1006 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 COL19A1Q14993 1142 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 USP17L6PQ6QN14 398 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 TTC3P53804 2025 aa16.61■□□□□ 0.25
CHMP4BP1-201ENST00000556017 CTSHP09668 335 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 WTAPQ15007 396 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 LEXMQ3ZCV2 418 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 EPC2Q52LR7 807 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 FAM26DQ5JW98 314 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 FAM178BQ8IXR5 827 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 FBXO22Q8NEZ5 403 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MYL10Q9BUA6 226 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 KIAA1671Q9BY89 1806 aa16.6■□□□□ 0.25
CHMP4BP1-201ENST00000556017 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 FIBPO43427 364 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 ATP9AO75110 1047 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 CAND2O75155 1236 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 STAM2O75886 525 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 AMHP03971 560 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 TRDNQ13061 729 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 PCNX4Q63HM2 1172 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 NEK9Q8TD19 979 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MAP4K1Q92918 833 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MRPL38Q96DV4 380 aaKnown RBP16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 SENP7Q9BQF6 1050 aa16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 RC3H2Q9HBD1 1191 aaKnown RBP16.59■□□□□ 0.25
CHMP4BP1-201ENST00000556017 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.25
CHMP4BP1-201ENST00000556017 PI4K2BG5E9Z4 385 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 H3BNC9 293 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 GPR37L1O60883 481 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 CHRNA1P02708 482 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 IL9P15248 144 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 KCNA2P16389 499 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 KCNA5P22460 613 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 TRAF1Q13077 416 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 NEDD9Q14511 834 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 RUFY4Q6ZNE9 571 aa16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 SRBD1Q8N5C6 995 aaKnown RBP16.58■□□□□ 0.24
CHMP4BP1-201ENST00000556017 SEPT8Q92599 483 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms