RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	WNT7A	O00755	349 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	MAFG	O15525	162 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	PPP6R2	O75170	966 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	NR3C2	P08235	984 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	EDNRB	P24530	442 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	ADCYAP1R1	P41586	468 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	CNTN2	Q02246	1040 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	PGM5	Q15124	567 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	ZNF174	Q15697	407 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	LETM2	Q2VYF4	491 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	ARRDC4	Q8NCT1	418 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	KCNG4	Q8TDN1	519 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	PGBD1	Q96JS3	809 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	NRBP1	Q9UHY1	535 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	CNPY2	Q9Y2B0	182 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	UBIAD1	Q9Y5Z9	338 aa		12.82	□□□□□ -0.36
RAD51B-222	ENST00000555907	TRIM43B	A6NCK2	446 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	TBX3	O15119	743 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	SPTLC2	O15270	562 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	CCNT1	O60563	726 aa	Known RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	EIF3J	O75822	258 aa	Known RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	ATP2B1	P20020	1258 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	PRPH	P41219	470 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	ALDH5A1	P51649	535 aa	Predicted RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	MRPS9	P82933	396 aa	Known RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	ATP2C1	P98194	919 aa	Predicted RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	PTGDR	Q13258	359 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	CEP55	Q53EZ4	464 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	MSL3	Q8N5Y2	521 aa	Known RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	CHAMP1	Q96JM3	812 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	SPATA32	Q96LK8	384 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	RNPC3	Q96LT9	517 aa	Known RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	FGD4	Q96M96	766 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	MTMR9	Q96QG7	549 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	MPHOSPH6	Q99547	160 aa	Known RBP	12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	MXRA8	Q9BRK3	442 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	PDLIM7	Q9NR12	457 aa		12.81	□□□□□ -0.36
RAD51B-222	ENST00000555907	MYH7B	A7E2Y1	1941 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	TCHH	Q07283	1943 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	MYH15	Q9Y2K3	1946 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	EYS	Q5T1H1	3165 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	IGLV3-22	A0A075B6J6	115 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	ASB14	A6NK59	587 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	FAM86B1	E9PN63	330 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	FAM86B2	P0C5J1	330 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	EIF2AK2	P19525	551 aa	Known RBP	12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	COL9A1	P20849	921 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	CCND2	P30279	289 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	MCM7	P33993	719 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	ZNF76	P36508	570 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	NBR1	Q14596	966 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	STK38	Q15208	465 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	STXBP2	Q15833	593 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	MAMDC4	Q6UXC1	1216 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	USP38	Q8NB14	1042 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	LENG9	Q96B70	501 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	FAM20A	Q96MK3	541 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	PURB	Q96QR8	312 aa	Known RBP	12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	KCNMB3	Q9NPA1	279 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	JADE2	Q9NQC1	790 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	DDX25	Q9UHL0	483 aa	Known RBP	12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	SRPRB	Q9Y5M8	271 aa	Known RBP	12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	ASTN1	O14525	1302 aa		12.8	□□□□□ -0.36
RAD51B-222	ENST00000555907	GOLGA6L22	H0YM25	854 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	TDP2	O95551	362 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	SNAI1	O95863	264 aa	Predicted RBP	12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	RARB	P10826	455 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	ITGB5	P18084	799 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	NCL	P19338	710 aa	Known RBP	12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	MCM4	P33991	863 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	EPHB4	P54760	987 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	SMAD3	P84022	425 aa	Known RBP	12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	CEBPZ	Q03701	1054 aa	Known RBP	12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	LRRC41	Q15345	812 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	ZNF579	Q8NAF0	562 aa	Known RBP	12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	IL31RA	Q8NI17	732 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	GPRASP2	Q96D09	838 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	INPP4A	Q96PE3	977 aa	Predicted RBP	12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	TMEM60	Q9H2L4	133 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	XPNPEP3	Q9NQH7	507 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	SYNGAP1	Q96PV0	1343 aa		12.79	□□□□□ -0.36
RAD51B-222	ENST00000555907	SLC37A4	O43826	429 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	NEMF	O60524	1076 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	PQBP1	O60828	265 aa	Known RBP	12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	AKR1A1	P14550	325 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	PTMS	P20962	102 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	ITGB8	P26012	769 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	ICAM3	P32942	547 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	SET	Q01105	290 aa	Predicted RBP	12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	TLE2	Q04725	743 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	PDIA5	Q14554	519 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	GRIN2C	Q14957	1233 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	CALCRL	Q16602	461 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms