RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SMARCC2Q8TAQ2 1214 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 EMSYQ7Z589 1322 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 SPATA31C2B4DYI2 1134 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 H3BRB1 525 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 MEIS2O14770 477 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 PLEKHA8P1O95397 391 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 LIFRP42702 1097 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 DEFB103AP81534 67 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 MBTPS1Q14703 1052 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 ASB2Q96Q27 587 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 TSPYL2Q9H2G4 693 aaPredicted RBP22.74■■□□□ 1.23
PRKCH-219ENST00000555906 TUT1Q9H6E5 874 aaKnown RBP22.74■■□□□ 1.23
PRKCH-219ENST00000555906 KAT6AQ92794 2004 aa22.74■■□□□ 1.23
PRKCH-219ENST00000555906 C17orf102A2RUQ5 167 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 EPOPA6NHQ4 379 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 GTPBP6O43824 516 aaPredicted RBP22.73■■□□□ 1.23
PRKCH-219ENST00000555906 MRPS5P82675 430 aaKnown RBP22.73■■□□□ 1.23
PRKCH-219ENST00000555906 TCTN1Q2MV58 587 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 CREB3L3Q68CJ9 461 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 USP17L6PQ6QN14 398 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 MICALL1Q8N3F8 863 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 SRBD1Q8N5C6 995 aaKnown RBP22.73■■□□□ 1.23
PRKCH-219ENST00000555906 USP26Q9BXU7 913 aa22.73■■□□□ 1.23
PRKCH-219ENST00000555906 SMIM10L2AP0DMW4 78 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 SMIM10L2BP0DMW5 78 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 COL9A3Q14050 684 aaPredicted RBP22.72■■□□□ 1.23
PRKCH-219ENST00000555906 NECTIN1Q15223 517 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 CYFIP1Q7L576 1253 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 ARNTL2Q8WYA1 636 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 GPR20Q99678 358 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 SENP7Q9BQF6 1050 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 BCAS3Q9H6U6 928 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 CERS4Q9HA82 394 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 MTCH2Q9Y6C9 303 aa22.72■■□□□ 1.23
PRKCH-219ENST00000555906 CAND2O75155 1236 aa22.71■■□□□ 1.23
PRKCH-219ENST00000555906 LGR5O75473 907 aa22.71■■□□□ 1.23
PRKCH-219ENST00000555906 GJB5O95377 273 aa22.71■■□□□ 1.23
PRKCH-219ENST00000555906 IKBKEQ14164 716 aa22.71■■□□□ 1.23
PRKCH-219ENST00000555906 ATP6V0A1Q93050 837 aa22.71■■□□□ 1.23
PRKCH-219ENST00000555906 RTEL1Q9NZ71 1219 aa22.71■■□□□ 1.23
PRKCH-219ENST00000555906 ZNF215Q9UL58 517 aaPredicted RBP22.71■■□□□ 1.23
PRKCH-219ENST00000555906 LCHNA4D1U4 455 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 RFXAPO00287 272 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 RXRAP19793 462 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 THPOP40225 353 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 BMP2KLQ5H9B9 411 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 TMTC3Q6ZXV5 915 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 TMCO2Q7Z6W1 182 aaPredicted RBP22.7■■□□□ 1.22
PRKCH-219ENST00000555906 NLRX1Q86UT6 975 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 ZBED2Q9BTP6 218 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 SLC12A7Q9Y666 1083 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 COL4A6Q14031 1691 aa22.7■■□□□ 1.22
PRKCH-219ENST00000555906 RSPH10B2B2RC85 870 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 TNFRSF10AO00220 468 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 RSPH10BP0C881 870 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 MKRN4PQ13434 485 aaPredicted RBP22.69■■□□□ 1.22
PRKCH-219ENST00000555906 TRIM50Q86XT4 487 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 CMTR1Q8N1G2 835 aaKnown RBP22.69■■□□□ 1.22
PRKCH-219ENST00000555906 GIMAP8Q8ND71 665 aaPredicted RBP22.69■■□□□ 1.22
PRKCH-219ENST00000555906 GPRASP2Q96D09 838 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 CDHR1Q96JP9 859 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 RAD9AQ99638 391 aa22.69■■□□□ 1.22
PRKCH-219ENST00000555906 BDP1A6H8Y1 2624 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 TREHO43280 583 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 GNAT1P11488 350 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 GRB10Q13322 594 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 MICU3Q86XE3 530 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 IL27Q8NEV9 243 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 ADAMTS19Q8TE59 1207 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 RNPEPQ9H4A4 650 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 PSTPIP2Q9H939 334 aa22.68■■□□□ 1.22
PRKCH-219ENST00000555906 PLEKHG4Q58EX7 1191 aa22.67■■□□□ 1.22
PRKCH-219ENST00000555906 RNF20Q5VTR2 975 aa22.67■■□□□ 1.22
PRKCH-219ENST00000555906 SPRED2Q7Z698 418 aa22.67■■□□□ 1.22
PRKCH-219ENST00000555906 FANCBQ8NB91 859 aa22.67■■□□□ 1.22
PRKCH-219ENST00000555906 LRRC2Q9BYS8 371 aa22.67■■□□□ 1.22
PRKCH-219ENST00000555906 NLRC5Q86WI3 1866 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 CNTNAP5Q8WYK1 1306 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 LPXNO60711 386 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 KCNA2P16389 499 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 AAK1Q2M2I8 961 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 CENPQQ7L2Z9 268 aaPredicted RBP22.66■■□□□ 1.22
PRKCH-219ENST00000555906 RAB11FIP4Q86YS3 637 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 DBF4BQ8NFT6 615 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 TELO2Q9Y4R8 837 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 TCF20Q9UGU0 1960 aaKnown RBP22.66■■□□□ 1.22
PRKCH-219ENST00000555906 BRWD1Q9NSI6 2320 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 RALGAPA2Q2PPJ7 1873 aa22.66■■□□□ 1.22
PRKCH-219ENST00000555906 LINC01553A4QN01 128 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 SPDYE3A6NKU9 549 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 AMHP03971 560 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 ITGB5P18084 799 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 ADAM17P78536 824 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 SP4Q02446 784 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 SKIV2LQ15477 1246 aaKnown RBP22.65■■□□□ 1.22
PRKCH-219ENST00000555906 UBE2SQ16763 222 aa22.65■■□□□ 1.22
PRKCH-219ENST00000555906 UTP14CQ5TAP6 766 aaKnown RBP22.65■■□□□ 1.22
PRKCH-219ENST00000555906 KRT40Q6A162 431 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms