RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 PHF7Q9BWX1 381 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-210ENST00000555810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
TUBB3-210ENST00000555810 RWDD3Q9Y3V2 267 aa16.75■□□□□ 0.27
TUBB3-210ENST00000555810 WDR19Q8NEZ3 1342 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 C17orf102A2RUQ5 167 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 MMP1P03956 469 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 LINC00271P0C7V0 271 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 NRIP1P48552 1158 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 NOVP48745 357 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 COASYQ13057 564 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 LAMC2Q13753 1193 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 CAMK1Q14012 370 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 FRMD5Q7Z6J6 570 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 ADSSL1Q8N142 457 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 PPTC7Q8NI37 304 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 PPP2R3CQ969Q6 453 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 RIPOR3Q96MK2 946 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 SEC62Q99442 399 aaKnown RBP16.74■□□□□ 0.27
TUBB3-210ENST00000555810 MRVI1Q9Y6F6 885 aa16.74■□□□□ 0.27
TUBB3-210ENST00000555810 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 VPS13AQ96RL7 3174 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 TREHO43280 583 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 KRT37O76014 449 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 DNAJB1P25685 340 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 NBL1P41271 181 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 BTG3Q14201 252 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-210ENST00000555810 EFHBQ8N7U6 833 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
TUBB3-210ENST00000555810 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-210ENST00000555810 MAF1Q9H063 256 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 KIAA1671Q9BY89 1806 aa16.73■□□□□ 0.27
TUBB3-210ENST00000555810 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 CACNA1BQ00975 2339 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-210ENST00000555810 ICAM3P32942 547 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 RMDN3Q96TC7 470 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 COL20A1Q9P218 1284 aa16.72■□□□□ 0.27
TUBB3-210ENST00000555810 MED19A0JLT2 244 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-210ENST00000555810 GLP2RO95838 553 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 EIF2AK2P19525 551 aaKnown RBP16.71■□□□□ 0.27
TUBB3-210ENST00000555810 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 TSHZ3Q63HK5 1081 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-210ENST00000555810 APBB2Q92870 758 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 CLP1Q92989 425 aaKnown RBP16.71■□□□□ 0.27
TUBB3-210ENST00000555810 EMID1Q96A84 441 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-210ENST00000555810 SPATA33Q96N06 139 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 PCDHGC5Q9Y5F6 944 aa16.71■□□□□ 0.27
TUBB3-210ENST00000555810 MYH6P13533 1939 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 PPFIA4O75335 1185 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 ITGB1P05556 798 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 SMIM10L2AP0DMW4 78 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 SMIM10L2BP0DMW5 78 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 TOP1P11387 765 aaKnown RBP16.7■□□□□ 0.26
TUBB3-210ENST00000555810 NUBP1P53384 320 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 RBM10P98175 930 aaKnown RBP16.7■□□□□ 0.26
TUBB3-210ENST00000555810 HSDL1Q3SXM5 330 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 TMEM105Q8N8V8 129 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 CPVLQ9H3G5 476 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 RNPEPQ9H4A4 650 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 KAT6AQ92794 2004 aa16.7■□□□□ 0.26
TUBB3-210ENST00000555810 PER2O15055 1255 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 PPFIA3O75145 1194 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 PDHBP11177 359 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 RRP12Q5JTH9 1297 aaKnown RBP16.69■□□□□ 0.26
TUBB3-210ENST00000555810 MYSM1Q5VVJ2 828 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 SPPL3Q8TCT6 385 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 POF1BQ8WVV4 589 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 C16orf70Q9BSU1 422 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 PLXNA4Q9HCM2 1894 aa16.69■□□□□ 0.26
TUBB3-210ENST00000555810 ORC4O43929 436 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
TUBB3-210ENST00000555810 GGPS1O95749 300 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 GOLGA8HP0CJ92 632 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 MYCLP12524 364 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-210ENST00000555810 KLHL23Q8NBE8 558 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 MICAL1Q8TDZ2 1067 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 APOL5Q9BWW9 433 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 TLE6Q9H808 572 aa16.68■□□□□ 0.26
TUBB3-210ENST00000555810 RC3H2Q9HBD1 1191 aaKnown RBP16.68■□□□□ 0.26
TUBB3-210ENST00000555810 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-210ENST00000555810 MRPL42Q9Y6G3 142 aaKnown RBP16.68■□□□□ 0.26
TUBB3-210ENST00000555810 TTC3P53804 2025 aa16.67■□□□□ 0.26
TUBB3-210ENST00000555810 H3BRB1 525 aa16.67■□□□□ 0.26
TUBB3-210ENST00000555810 ENPP3O14638 875 aa16.67■□□□□ 0.26
TUBB3-210ENST00000555810 NR3C2P08235 984 aa16.67■□□□□ 0.26
TUBB3-210ENST00000555810 GHRP10912 638 aa16.67■□□□□ 0.26
TUBB3-210ENST00000555810 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-210ENST00000555810 ZNF543Q08ER8 600 aa16.67■□□□□ 0.26
TUBB3-210ENST00000555810 AAMPQ13685 434 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms