RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GH1P01241 217 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 INHAP05111 366 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 SMPD1P17405 629 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 UBA1P22314 1058 aaKnown RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 TRIM32Q13049 653 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 ITGB3BPQ13352 177 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 SLC9C1Q4G0N8 1177 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 CELF3Q5SZQ8 465 aaKnown RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 METTL7BQ6UX53 244 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 DHX37Q8IY37 1157 aaKnown RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 TRPV1Q8NER1 839 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 LEO1Q8WVC0 666 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 EMID1Q96A84 441 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 GBP4Q96PP9 640 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 HMX1Q9NP08 348 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-221ENST00000555773 STK24Q9Y6E0 443 aa14.07□□□□□ -0.16
SHMT2-221ENST00000555773 MGAMO43451 1857 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 MSCO60682 206 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 DUSP11O75319 330 aaKnown RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 GGPS1O95749 300 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 MARCKSP29966 332 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 CNGA1P29973 690 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 LONP1P36776 959 aaKnown RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 KRT76Q01546 638 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 PPP2R5CQ13362 524 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 ZNF746Q6NUN9 644 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 B3GNT9Q6UX72 402 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 CYFIP1Q7L576 1253 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 AK8Q96MA6 479 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 JPH1Q9HDC5 661 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 SLC9A2Q9UBY0 812 aa14.06□□□□□ -0.16
SHMT2-221ENST00000555773 GNEQ9Y223 722 aaKnown RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 RBBP6Q7Z6E9 1792 aaKnown RBP14.06□□□□□ -0.16
SHMT2-221ENST00000555773 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-221ENST00000555773 CUTAO60888 179 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 FARP2O94887 1054 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-221ENST00000555773 SFNP31947 248 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 TECP42680 631 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 ME1P48163 572 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 IL17AQ16552 155 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 SMAP1Q8IYB5 467 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-221ENST00000555773 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 SH3TC2Q8TF17 1288 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 AP5M1Q9H0R1 490 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 FBXO2Q9UK22 296 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-221ENST00000555773 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 ELP1O95163 1332 aa14.05□□□□□ -0.16
SHMT2-221ENST00000555773 LCTP09848 1927 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 VWA3AA6NCI4 1184 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 DYNC1LI2O43237 492 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-221ENST00000555773 RARBP10826 455 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 CCND3P30281 292 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-221ENST00000555773 JAK3P52333 1124 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 NKX3-2P78367 333 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 ARHGAP1Q07960 439 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 SPIRE1Q08AE8 756 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 BRDTQ58F21 947 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-221ENST00000555773 ADALQ6DHV7 355 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 GJA10Q969M2 543 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 ARMC5Q96C12 935 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 SPATA33Q96N06 139 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 UIMC1Q96RL1 719 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 SPC25Q9HBM1 224 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 LRWD1Q9UFC0 647 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 DDX20Q9UHI6 824 aaKnown RBP14.04□□□□□ -0.16
SHMT2-221ENST00000555773 PCDHA7Q9UN72 937 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 PCDHA10Q9Y5I2 948 aa14.04□□□□□ -0.16
SHMT2-221ENST00000555773 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
SHMT2-221ENST00000555773 SLC26A4O43511 780 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 PPFIA4O75335 1185 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 ATG7O95352 703 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 GJA9P57773 515 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 EPHA7Q15375 998 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-221ENST00000555773 TMEM63BQ5T3F8 832 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 TMEM87AQ8NBN3 555 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 OR6J1Q8NGC5 347 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 PPTC7Q8NI37 304 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 ERMNQ8TAM6 284 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 COPS5Q92905 334 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 UNC45AQ9H3U1 944 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 BCAS3Q9H6U6 928 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 DISC1Q9NRI5 854 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 MYH7BA7E2Y1 1941 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 CASP8AP2Q9UKL3 1982 aa14.03□□□□□ -0.16
SHMT2-221ENST00000555773 ZSWIM8A7E2V4 1837 aa14.02□□□□□ -0.16
SHMT2-221ENST00000555773 GOLGA6L4A6NEF3 574 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 A6NJR5 290 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms