RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 EFCAB14O75071 495 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 CA3P07451 260 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 NAPAP54920 295 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 UBE2SQ16763 222 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 HERC6Q8IVU3 1022 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 GPR20Q99678 358 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 PCDHA6Q9UN73 950 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 PCDHA8Q9Y5H6 950 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 ABHD14A-ACY1A0A1B0GW23 586 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 TLL1O43897 1013 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 MTMR1Q13613 665 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 COL9A3Q14050 684 aaPredicted RBP17.69■□□□□ 0.42
SNX6-205ENST00000555648 IKBKEQ14164 716 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 ZNF618Q5T7W0 954 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 TSPYL2Q9H2G4 693 aaPredicted RBP17.69■□□□□ 0.42
SNX6-205ENST00000555648 EMSYQ7Z589 1322 aa17.69■□□□□ 0.42
SNX6-205ENST00000555648 CCDC196A0A1B0GTZ2 297 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 RSPH10B2B2RC85 870 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 GTPBP6O43824 516 aaPredicted RBP17.68■□□□□ 0.42
SNX6-205ENST00000555648 NBNO60934 754 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 RSPH10BP0C881 870 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
SNX6-205ENST00000555648 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 CCDC85BQ15834 202 aaPredicted RBP17.68■□□□□ 0.42
SNX6-205ENST00000555648 SERINC5Q86VE9 423 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 MICALL1Q8N3F8 863 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 SYMPKQ92797 1274 aaKnown RBP17.68■□□□□ 0.42
SNX6-205ENST00000555648 COL25A1Q9BXS0 654 aaPredicted RBP17.68■□□□□ 0.42
SNX6-205ENST00000555648 BCAS3Q9H6U6 928 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 PKD2L1Q9P0L9 805 aa17.68■□□□□ 0.42
SNX6-205ENST00000555648 V9GY48 417 aaPredicted RBP17.68■□□□□ 0.42
SNX6-205ENST00000555648 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
SNX6-205ENST00000555648 hCG_1984214I3L0E3 225 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 MAFGO15525 162 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 LGR5O75473 907 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 CXCL10P02778 98 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 NEFLP07196 543 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 ADCY7P51828 1080 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 WDR5P61964 334 aaKnown RBP17.67■□□□□ 0.42
SNX6-205ENST00000555648 ARHGAP4P98171 946 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 PPP1R18Q6NYC8 613 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 TRIM50Q86XT4 487 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 ZNF713Q8N859 430 aaPredicted RBP17.67■□□□□ 0.42
SNX6-205ENST00000555648 SEPT1Q8WYJ6 367 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 GLT8D2Q9H1C3 349 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 RNPEPQ9H4A4 650 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 SETD4Q9NVD3 440 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 BRPF3Q9ULD4 1205 aa17.67■□□□□ 0.42
SNX6-205ENST00000555648 TREHO43280 583 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 CAND2O75155 1236 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 REC8O95072 547 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 FOSP01100 380 aaPredicted RBP17.66■□□□□ 0.42
SNX6-205ENST00000555648 TCF7P36402 384 aaPredicted RBP17.66■□□□□ 0.42
SNX6-205ENST00000555648 ADGRE1Q14246 886 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 TRIM71Q2Q1W2 868 aaKnown RBP17.66■□□□□ 0.42
SNX6-205ENST00000555648 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 TEX2Q8IWB9 1127 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 ARNTL2Q8WYA1 636 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 GLG1Q92896 1179 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 WNT8BQ93098 351 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 JAKMIP1Q96N16 626 aaKnown RBP17.66■□□□□ 0.42
SNX6-205ENST00000555648 CERS4Q9HA82 394 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 RIC8AQ9NPQ8 531 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 JADE2Q9NQC1 790 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 UBIAD1Q9Y5Z9 338 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 CNTNAP5Q8WYK1 1306 aa17.66■□□□□ 0.42
SNX6-205ENST00000555648 KIAA1217Q5T5P2 1943 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 SMCO2A6NFE2 343 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 CTSHP09668 335 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 ITGB5P18084 799 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 ZNF76P36508 570 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 METAP2P50579 478 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNX6-205ENST00000555648 RCAN1P53805 252 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 HIC1Q14526 733 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 GPNMBQ14956 572 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 SKIV2LQ15477 1246 aaKnown RBP17.65■□□□□ 0.42
SNX6-205ENST00000555648 SEPT8Q92599 483 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 SDF4Q9BRK5 362 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 ERAP1Q9NZ08 941 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 NRCAMQ92823 1304 aa17.65■□□□□ 0.42
SNX6-205ENST00000555648 ATP9AO75110 1047 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 AMHP03971 560 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 KCNA2P16389 499 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 PSMA5P28066 241 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 AKAP17AQ02040 695 aaKnown RBP17.64■□□□□ 0.41
SNX6-205ENST00000555648 RSPH3Q86UC2 560 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 TNPO1Q92973 898 aaKnown RBP17.64■□□□□ 0.41
SNX6-205ENST00000555648 SMARCAD1Q9H4L7 1026 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 AZI2Q9H6S1 392 aa17.64■□□□□ 0.41
SNX6-205ENST00000555648 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms