RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-220ENST00000555634 SMAP1Q8IYB5 467 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-220ENST00000555634 RDM1Q8NG50 284 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 ZNF296Q8WUU4 475 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-220ENST00000555634 SLC5A5Q92911 643 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 LENG9Q96B70 501 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 NT5C3AQ9H0P0 336 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 PKD2L1Q9P0L9 805 aa12.6□□□□□ -0.39
SHMT2-220ENST00000555634 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
SHMT2-220ENST00000555634 WNT7AO00755 349 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 HMGCRP04035 888 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 TXNP10599 105 aaKnown RBP12.59□□□□□ -0.39
SHMT2-220ENST00000555634 ICAM3P32942 547 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 FLT3LGP49771 235 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-220ENST00000555634 MIER3Q7Z3K6 550 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 SENP7Q9BQF6 1050 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 CSRNP2Q9H175 543 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 MLXIPQ9HAP2 919 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 SLC9A2Q9UBY0 812 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 ASTN1O14525 1302 aa12.59□□□□□ -0.39
SHMT2-220ENST00000555634 MYH11P35749 1972 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 POTEMA6NI47 508 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 ARP10275 920 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 STAT6P42226 847 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 SYKP43405 635 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 ACVR2BQ13705 512 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 ZRSR1Q15695 479 aaKnown RBP12.58□□□□□ -0.4
SHMT2-220ENST00000555634 RESP18Q5W5W9 173 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 CABP7Q86V35 215 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 DHX37Q8IY37 1157 aaKnown RBP12.58□□□□□ -0.4
SHMT2-220ENST00000555634 IGSF22Q8N9C0 903 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 NPLOC4Q8TAT6 608 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 CYP2W1Q8TAV3 490 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 USP6NLQ92738 828 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 SYMPKQ92797 1274 aaKnown RBP12.58□□□□□ -0.4
SHMT2-220ENST00000555634 ATP6V0A1Q93050 837 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 FGD4Q96M96 766 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 R3HDMLQ9H3Y0 253 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 LMBRD1Q9NUN5 540 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 DDX19AQ9NUU7 478 aaKnown RBP12.58□□□□□ -0.4
SHMT2-220ENST00000555634 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.4
SHMT2-220ENST00000555634 ADCY3O60266 1144 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 PSMD10O75832 226 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 GGPS1O95749 300 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 GH1P01241 217 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 PSAPP07602 524 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 AKR1A1P14550 325 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 PFKFB1P16118 471 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 UBA1P22314 1058 aaKnown RBP12.57□□□□□ -0.4
SHMT2-220ENST00000555634 CCT6AP40227 531 aaKnown RBP12.57□□□□□ -0.4
SHMT2-220ENST00000555634 FAM160B1Q5W0V3 765 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 IQSEC1Q6DN90 963 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 KANK3Q6NY19 840 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 C4orf32Q8N8J7 132 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 IQUBQ8NA54 791 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 PXYLP1Q8TE99 480 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 HAS1Q92839 578 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 ZFP91Q96JP5 570 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-220ENST00000555634 CLIC6Q96NY7 704 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 CUEDC2Q9H467 287 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 AZI2Q9H6S1 392 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 TRIM17Q9Y577 477 aa12.57□□□□□ -0.4
SHMT2-220ENST00000555634 KAT6AQ92794 2004 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 BACH1O14867 736 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 KCNA2P16389 499 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 MUTP22033 750 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 CNGA1P29973 690 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-220ENST00000555634 SP4Q02446 784 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 LAMC2Q13753 1193 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-220ENST00000555634 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 CCSER1Q9C0I3 900 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 TUFT1Q9NNX1 390 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms