RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 ABCC12Q96J65 1359 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 MYO1FO00160 1098 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 AFPP02771 609 aaKnown RBP8.94□□□□□ -0.98
SYNE2-220ENST00000555612 PLA2G4BP0C869 781 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 ZNF131P52739 623 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 ARMCX2Q7L311 632 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-220ENST00000555612 TRIML1Q8N9V2 468 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 CHMP6Q96FZ7 201 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 PIDD1Q9HB75 910 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 PCDHA6Q9UN73 950 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 PCDHA8Q9Y5H6 950 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 EBAG9O00559 213 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 PEX3P56589 373 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 ZNF668Q96K58 619 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-220ENST00000555612 ZNRF3Q9ULT6 936 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 MROH7-TTC4A0A0A0MT08 1334 aa8.94□□□□□ -0.98
SYNE2-220ENST00000555612 ZNF500O60304 480 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 MMP1P03956 469 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 CYP2E1P05181 493 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 JAK3P52333 1124 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ZNF449Q6P9G9 518 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ANKRD13CQ8N6S4 541 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 BANK1Q8NDB2 785 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 STMN2Q93045 179 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 CCDC51Q96ER9 411 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 KRT10P13645 584 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 TUBB2AQ13885 445 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 SPATA1Q5VX52 437 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 MYLK4Q86YV6 388 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 DCLK2Q8N568 766 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 NSUN7Q8NE18 718 aaKnown RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 MGARPQ8TDB4 240 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 TUBB2BQ9BVA1 445 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 BHMT2Q9H2M3 363 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ABCF3Q9NUQ8 709 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 SFI1A8K8P3 1242 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 NAA35Q5VZE5 725 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 DENND2CQ68D51 928 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 FASTKD5Q7L8L6 764 aaKnown RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 GRAMD1CQ8IYS0 662 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 P3H4Q92791 437 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 FAM167AQ96KS9 214 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 STRBPQ96SI9 672 aaKnown RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 DPH5Q9H2P9 285 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 CPDO75976 1380 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 CDK12Q9NYV4 1490 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 WDR64B1ANS9 1081 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ZBTB5O15062 677 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 MED7O43513 233 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 S100BP04271 92 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ARL4AP40617 200 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 EPHB1P54762 984 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 CEP85LQ5SZL2 805 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 C17orf53Q8N3J3 647 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 PIGOQ8TEQ8 1089 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 TUBGCP2Q9BSJ2 902 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ATP6V0A4Q9HBG4 840 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 KCNA4P22459 653 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 U2AF2P26368 475 aaKnown RBP eCLIP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ABCD1P33897 745 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 PHBP35232 272 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 SLFNL1Q499Z3 407 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 IQGAP3Q86VI3 1631 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 SCN4BQ8IWT1 228 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 THEM5Q8N1Q8 247 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 GIMAP8Q8ND71 665 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-220ENST00000555612 URGCPQ8TCY9 931 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 CFAP57Q96MR6 1250 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 TMEM47Q9BQJ4 181 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 SMYD2Q9NRG4 433 aa8.93□□□□□ -0.98
SYNE2-220ENST00000555612 ERCC6L2Q5T890 1561 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 PTCH1Q13635 1447 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 UTYO14607 1347 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 HEXIM1O94992 359 aaKnown RBP8.92□□□□□ -0.98
SYNE2-220ENST00000555612 IGKV5-2P06315 115 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 ACTN1P12814 892 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 GUCY2FP51841 1108 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 MNAT1P51948 309 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 SLC39A14Q15043 492 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 NXNQ6DKJ4 435 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 MCUQ8NE86 351 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 TRIM58Q8NG06 486 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 TRIM56Q9BRZ2 755 aaKnown RBP8.92□□□□□ -0.98
SYNE2-220ENST00000555612 MOSPD1Q9UJG1 213 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 SRGAP2BP0DMP2 458 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 ECE1P42892 770 aa8.92□□□□□ -0.98
SYNE2-220ENST00000555612 COPB1P53618 953 aaKnown RBP8.92□□□□□ -0.98
SYNE2-220ENST00000555612 DYNLT1P63172 113 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms