RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PLSCR1O15162 318 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 RAMP2O60895 175 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 FBLP22087 321 aaKnown RBP5.76□□□□□ -1.49
SRP54-207ENST00000555535 STEAP3Q658P3 488 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 E4F1Q66K89 784 aaPredicted RBP5.76□□□□□ -1.49
SRP54-207ENST00000555535 ARRDC4Q8NCT1 418 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 AGAP2Q99490 1192 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 BCL11AQ9H165 835 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 MSL2Q9HCI7 577 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 GPRC5CQ9NQ84 441 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 AKT3Q9Y243 479 aa5.76□□□□□ -1.49
SRP54-207ENST00000555535 TADA3O75528 432 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 FBXO21O94952 628 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 C1SP09871 688 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 CSF2RBP32927 897 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 ZC3H6P61129 1189 aaKnown RBP5.75□□□□□ -1.49
SRP54-207ENST00000555535 USP10Q14694 798 aaKnown RBP5.75□□□□□ -1.49
SRP54-207ENST00000555535 INF2Q27J81 1249 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 MAMDC4Q6UXC1 1216 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 TMC5Q6UXY8 1006 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 RUFY4Q6ZNE9 571 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 Q6ZSN1 163 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 SND1Q7KZF4 910 aaKnown RBP eCLIP5.75□□□□□ -1.49
SRP54-207ENST00000555535 LARP4BQ92615 738 aaKnown RBP5.75□□□□□ -1.49
SRP54-207ENST00000555535 KATNBL1Q9H079 304 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 ZNF703Q9H7S9 590 aaPredicted RBP5.75□□□□□ -1.49
SRP54-207ENST00000555535 MMRN2Q9H8L6 949 aa5.75□□□□□ -1.49
SRP54-207ENST00000555535 H7BY64 318 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 KNG1P01042 644 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 VASNQ6EMK4 673 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 TRIM48Q8IWZ4 208 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 C19orf47Q8N9M1 422 aaKnown RBP5.74□□□□□ -1.49
SRP54-207ENST00000555535 IL17DQ8TAD2 202 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 CRBNQ96SW2 442 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 CYP26B1Q9NR63 512 aa5.74□□□□□ -1.49
SRP54-207ENST00000555535 ANKRD34BA5PLL1 514 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 NAT2P11245 290 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 CR2P20023 1033 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 KCNAB2Q13303 367 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 CCDC142Q17RM4 750 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 PCSK4Q6UW60 755 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 DNAJC14Q6Y2X3 702 aaPredicted RBP5.73□□□□□ -1.49
SRP54-207ENST00000555535 DTX3Q8N9I9 347 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 EMC9Q9Y3B6 208 aa5.73□□□□□ -1.49
SRP54-207ENST00000555535 NOP56O00567 594 aaKnown RBP5.72□□□□□ -1.49
SRP54-207ENST00000555535 DGKIO75912 1065 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 KCNH1O95259 989 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 BCL6P41182 706 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 TAGLNQ01995 201 aaKnown RBP5.72□□□□□ -1.49
SRP54-207ENST00000555535 FNDC7Q5VTL7 733 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 CYP4F22Q6NT55 531 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 ULK2Q8IYT8 1036 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 TTLL11Q8NHH1 800 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 NPLOC4Q8TAT6 608 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 DIO2Q92813 273 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 CARD11Q9BXL7 1154 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 SMOC1Q9H4F8 434 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 MYOTQ9UBF9 498 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 PPT2Q9UMR5 302 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 OAZ3Q9UMX2 235 aa5.72□□□□□ -1.49
SRP54-207ENST00000555535 PEX11BO96011 259 aa5.71□□□□□ -1.5
SRP54-207ENST00000555535 ERCC3P19447 782 aa5.71□□□□□ -1.5
SRP54-207ENST00000555535 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
SRP54-207ENST00000555535 COL9A2Q14055 689 aaPredicted RBP5.71□□□□□ -1.5
SRP54-207ENST00000555535 NLRP10Q86W26 655 aa5.71□□□□□ -1.5
SRP54-207ENST00000555535 BVESQ8NE79 360 aa5.71□□□□□ -1.5
SRP54-207ENST00000555535 FRS2Q8WU20 508 aa5.71□□□□□ -1.5
SRP54-207ENST00000555535 WASF3Q9UPY6 502 aa5.71□□□□□ -1.5
SRP54-207ENST00000555535 TMEM191CA6NGB0 347 aa5.7□□□□□ -1.5
SRP54-207ENST00000555535 ZNF143P52747 638 aaPredicted RBP5.7□□□□□ -1.5
SRP54-207ENST00000555535 GPR155Q7Z3F1 870 aa5.7□□□□□ -1.5
SRP54-207ENST00000555535 OR6P1Q8NGX9 317 aa5.7□□□□□ -1.5
SRP54-207ENST00000555535 NKX2-4Q9H2Z4 354 aa5.7□□□□□ -1.5
SRP54-207ENST00000555535 EPB41L1Q9H4G0 881 aa5.7□□□□□ -1.5
SRP54-207ENST00000555535 H0Y858 1186 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 KRIT1O00522 736 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 CUTAO60888 179 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 LSAMPQ13449 338 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 ZMAT1Q5H9K5 638 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 APBA2Q99767 749 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 PARPBPQ9NWS1 579 aa5.69□□□□□ -1.5
SRP54-207ENST00000555535 BMP5P22003 454 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 IL12RB1P42701 662 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 HHEXQ03014 270 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 GTF2IRD2BQ6EKJ0 949 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 GTF2IRD2Q86UP8 949 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 PROSER1Q86XN7 944 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 ZNF513Q8N8E2 541 aaPredicted RBP5.68□□□□□ -1.5
SRP54-207ENST00000555535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRP54-207ENST00000555535 KLHL6Q8WZ60 621 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 OR14A2Q96R54 314 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 ARHGAP20Q9P2F6 1191 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 PCDHB10Q9UN67 800 aa5.68□□□□□ -1.5
SRP54-207ENST00000555535 REXO2Q9Y3B8 237 aaKnown RBP5.68□□□□□ -1.5
SRP54-207ENST00000555535 MEFVO15553 781 aaPredicted RBP5.67□□□□□ -1.5
SRP54-207ENST00000555535 CDC14BO60729 498 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 HIBADHP31937 336 aaKnown RBP5.67□□□□□ -1.5
SRP54-207ENST00000555535 MRPS21P82921 87 aaKnown RBP5.67□□□□□ -1.5
SRP54-207ENST00000555535 TESK1Q15569 626 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 ZNF627Q7L945 461 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms