RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 ZBTB5O15062 677 aa9.16□□□□□ -0.94
LINC00641-201ENST00000555379 GAS2O43903 313 aaKnown RBP9.16□□□□□ -0.94
LINC00641-201ENST00000555379 EFNA5P52803 228 aa9.16□□□□□ -0.94
LINC00641-201ENST00000555379 PPFIA1Q13136 1202 aa9.16□□□□□ -0.94
LINC00641-201ENST00000555379 MAP3K21Q5TCX8 1036 aa9.16□□□□□ -0.94
LINC00641-201ENST00000555379 LRRC47Q8N1G4 583 aaKnown RBP9.16□□□□□ -0.94
LINC00641-201ENST00000555379 ATP6V0A4Q9HBG4 840 aa9.16□□□□□ -0.94
LINC00641-201ENST00000555379 LRRD1A4D1F6 860 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 A6NJR5 290 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 DDX5P17844 614 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 XPAP23025 273 aaPredicted RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 NSFP46459 744 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 ZNF445P59923 1031 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 PRKG1Q13976 671 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 STILQ15468 1287 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SBK1Q52WX2 424 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 CHST3Q7LGC8 479 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 FAM76AQ8TAV0 307 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 PPP1R2P1Q96PQ5 205 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 CCDC68Q9H2F9 335 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SAMD15Q9P1V8 674 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 NWD1Q149M9 1564 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 DDX39AO00148 427 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 BRD1O95696 1058 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 RFC1P35251 1148 aaPredicted RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 PIK3CAP42336 1068 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 RNASELQ05823 741 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 KRT39Q6A163 491 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 ZNF579Q8NAF0 562 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SMC1BQ8NDV3 1235 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 POMGNT1Q8WZA1 660 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 PGBD4Q96DM1 585 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 HAUS4Q9H6D7 363 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 ZC4H2Q9NQZ6 224 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 PDS5AQ29RF7 1337 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 ASAP2O43150 1006 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 USP11P51784 963 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 MYL7Q01449 175 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 C8orf74Q6P047 294 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 CHST13Q8NET6 341 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 AFAP1L1Q8TED9 768 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SH3TC2Q8TF17 1288 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
LINC00641-201ENST00000555379 DBNDD1Q9H9R9 158 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 PARVGQ9HBI0 331 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 MINPP1Q9UNW1 487 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SCINQ9Y6U3 715 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 SLIT1O75093 1534 aa9.15□□□□□ -0.94
LINC00641-201ENST00000555379 IKBKBO14920 756 aa9.15□□□□□ -0.95
LINC00641-201ENST00000555379 HNRNPDLO14979 420 aaKnown RBP9.15□□□□□ -0.95
LINC00641-201ENST00000555379 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.95
LINC00641-201ENST00000555379 CCDC186Q7Z3E2 898 aa9.15□□□□□ -0.95
LINC00641-201ENST00000555379 PEX26Q7Z412 305 aa9.15□□□□□ -0.95
LINC00641-201ENST00000555379 MICAL1Q8TDZ2 1067 aa9.15□□□□□ -0.95
LINC00641-201ENST00000555379 MTFR1LQ9H019 292 aa9.15□□□□□ -0.95
LINC00641-201ENST00000555379 RPF1Q9H9Y2 349 aaKnown RBP9.15□□□□□ -0.95
LINC00641-201ENST00000555379 TMEM110-MUSTN1A8MSY1 372 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 MAGEB2O15479 319 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 SMIM24O75264 130 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 U2AF2P26368 475 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 PDIA3P30101 505 aaKnown RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 PEX19P40855 299 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 ZBTB16Q05516 673 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 GABPAQ06546 454 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 ELOA2Q8IYF1 753 aaPredicted RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 ZNF560Q96MR9 790 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 DDX23Q9BUQ8 820 aaKnown RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 DNAI1Q9UI46 699 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 ZMYM2Q9UBW7 1377 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 TBX3O15119 743 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 RPN1P04843 607 aaKnown RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 NBPF9Q3BBW0 867 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 KBTBD13C9JR72 458 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 SH3BP5O60239 455 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 H2AFZP0C0S5 128 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 ACTN1P12814 892 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 BLVRAP53004 296 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 IGBP1P78318 339 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 IRX4P78413 519 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 H2AFVQ71UI9 128 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 INTS8Q75QN2 995 aaKnown RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 BEST2Q8NFU1 509 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 CEP170P1Q96L14 293 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 KIF2CQ99661 725 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 THAP9Q9H5L6 903 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 NYAP2Q9P242 653 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 CPSF3Q9UKF6 684 aaKnown RBP9.14□□□□□ -0.95
LINC00641-201ENST00000555379 GINS2Q9Y248 185 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 NFE2L3Q9Y4A8 694 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 KIF28PB7ZC32 967 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 KCNQ3O43525 872 aa9.14□□□□□ -0.95
LINC00641-201ENST00000555379 S100BP04271 92 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms