RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 SERPING1P05155 500 aa10.47□□□□□ -0.73
SYNE2-213ENST00000554805 MRPL12P52815 198 aaKnown RBP10.47□□□□□ -0.73
SYNE2-213ENST00000554805 ADAM9Q13443 819 aa10.47□□□□□ -0.73
SYNE2-213ENST00000554805 KLHDC7AQ5VTJ3 777 aa10.47□□□□□ -0.73
SYNE2-213ENST00000554805 TTBK2Q6IQ55 1244 aa10.47□□□□□ -0.73
SYNE2-213ENST00000554805 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
SYNE2-213ENST00000554805 MTMR9Q96QG7 549 aa10.47□□□□□ -0.73
SYNE2-213ENST00000554805 KCNK3O14649 394 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 RIMBP2O15034 1052 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 KIAA0754O94854 1291 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 PDHBP11177 359 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 PRLRP16471 622 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 KLRC1P26715 233 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 NT5C2P49902 561 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.733e-6■■■■□ 25.3
SYNE2-213ENST00000554805 PSMD2Q13200 908 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 NNTQ13423 1086 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 ALS2CLQ60I27 953 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 LRRC55Q6ZSA7 311 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 FAM196AQ6ZSG2 479 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 SLF2Q8IX21 1173 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
SYNE2-213ENST00000554805 CEP72Q9P209 647 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 BCCIPQ9P287 314 aaKnown RBP eCLIP10.46□□□□□ -0.73
SYNE2-213ENST00000554805 GGA1Q9UJY5 639 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.73
SYNE2-213ENST00000554805 GOLGA6L10A6NI86 522 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 H0YHG0 523 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 CETN3O15182 167 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 CEP104O60308 925 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 KRT14P02533 472 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 AKR1B1P15121 316 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 GPSM2P81274 684 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 DCAF17Q5H9S7 520 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-213ENST00000554805 KCTD1Q719H9 257 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 ZIM3Q96PE6 472 aa10.46□□□□□ -0.73
SYNE2-213ENST00000554805 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
SYNE2-213ENST00000554805 SSU72P8A0A1W2PR75 194 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 GLI1P08151 1106 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 IKQ13123 557 aaPredicted RBP10.46□□□□□ -0.74
SYNE2-213ENST00000554805 PDIA5Q14554 519 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 RPS6KA1Q15418 735 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 GBP6Q6ZN66 633 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 RNF10Q8N5U6 811 aaKnown RBP10.46□□□□□ -0.74
SYNE2-213ENST00000554805 CUL5Q93034 780 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 PACSIN1Q9BY11 444 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 PSTPIP2Q9H939 334 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 ATP6V0A2Q9Y487 856 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 FAM169AQ9Y6X4 670 aa10.46□□□□□ -0.74
SYNE2-213ENST00000554805 POTEB3A0JP26 581 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 POTECB2RU33 542 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 PLA2G4BP0C869 781 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 TM4SF1P30408 202 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 HPDP32754 393 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-213ENST00000554805 TNNC1P63316 161 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 GTF2IP78347 998 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ECM1Q16610 540 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ASPRV1Q53RT3 343 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 MSL1Q68DK7 614 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 POTEBQ6S5H4 581 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 DNAAF5Q86Y56 855 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 EFCAB13Q8IY85 973 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-213ENST00000554805 A0A087WUV0 522 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-213ENST00000554805 A0A087X0T9 212 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 G3V3G9 751 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 FAM153BP0C7A2 387 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 FAM228BP0C875 321 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 FAM153CQ494X1 144 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 RNF187Q5TA31 235 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-213ENST00000554805 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 PACS2Q86VP3 889 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 PROM2Q8N271 834 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 GOLPH3Q9H4A6 298 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 RIOX1Q9H6W3 641 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 FAM153AQ9UHL3 310 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 GPR75-ASB3A0A0A6YYF3 556 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 EIF3HO15372 352 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ERLIN2O94905 339 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ACTN1P12814 892 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 STAT3P40763 770 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ORC2Q13416 577 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-213ENST00000554805 CEP85LQ5SZL2 805 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 TRAPPC3LQ5T215 181 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 TADA2BQ86TJ2 420 aa10.45□□□□□ -0.74
SYNE2-213ENST00000554805 ADGRF4Q8IZF3 695 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms