RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 NBPF20Q3BBV1 942 aa14.72□□□□□ -0.05
MTHFD1-208ENST00000554739 NIPA1Q7RTP0 329 aa14.72□□□□□ -0.05
MTHFD1-208ENST00000554739 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 DCDC2CA8MYV0 355 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 CD4P01730 458 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 USP11P51784 963 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 SH3RF1Q7Z6J0 888 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 FAM126BQ8IXS8 530 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 OXER1Q8TDS5 423 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 GPR20Q99678 358 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 AGO4Q9HCK5 861 aaKnown RBP14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 PDLIM7Q9NR12 457 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 PKD2L1Q9P0L9 805 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
MTHFD1-208ENST00000554739 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 KIAA0355O15063 1070 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 F2P00734 622 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 CLTBP09497 229 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 ITGB3BPQ13352 177 aaPredicted RBP14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 NFRKBQ6P4R8 1299 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 PLA2G4DQ86XP0 818 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 TBCKQ8TEA7 893 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 TMX3Q96JJ7 454 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 C16orf70Q9BSU1 422 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 TRPV6Q9H1D0 765 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
MTHFD1-208ENST00000554739 KIAA1217Q5T5P2 1943 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 CYP3A7-CYP3A51PA0A087WV96 503 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 GSTTP1A0A1W2PQM5 241 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 HAS3O00219 553 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 NOP56O00567 594 aaKnown RBP14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 DHX15O43143 795 aaKnown RBP14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 ZNF286BP0CG31 522 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 CYP3A7P24462 503 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 MCM2P49736 904 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 PSEN2P49810 448 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 PTPN11Q06124 597 aaPredicted RBP14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 KRT25Q7Z3Z0 450 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 PPP1R13LQ8WUF5 828 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 LENG9Q96B70 501 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 PRO3102Q9H379 93 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 PRDM5Q9NQX1 630 aaPredicted RBP14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 PRKAG2Q9UGJ0 569 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 TBX21Q9UL17 535 aa14.69□□□□□ -0.06
MTHFD1-208ENST00000554739 NFASCO94856 1347 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 ALPK3Q96L96 1907 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 TLR3O15455 904 aaKnown RBP14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 B4GALT4O60513 344 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 MMP1P03956 469 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 LGALS2P05162 132 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 ITGB8P26012 769 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 CHMP4BP1P59074 171 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 HMGN5P82970 282 aaKnown RBP14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 SP4Q02446 784 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 NONOQ15233 471 aaKnown RBP eCLIP14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 PRR16Q569H4 304 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 KRT40Q6A162 431 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 SESTD1Q86VW0 696 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 SEPT1Q8WYJ6 367 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 GDF15Q99988 308 aa14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 JPH1Q9HDC5 661 aaPredicted RBP14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 TRMT13Q9NUP7 481 aaKnown RBP14.68□□□□□ -0.06
MTHFD1-208ENST00000554739 H3BRB1 525 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 IPO5O00410 1097 aaKnown RBP14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 KRT2P35908 639 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 TCF7P36402 384 aaPredicted RBP14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 MAGEA10P43363 369 aaPredicted RBP14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 NR5A1Q13285 461 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 TRIM29Q14134 588 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 MFSD10Q14728 455 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 INF2Q27J81 1249 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 KIAA0753Q2KHM9 967 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 FAM47CQ5HY64 1035 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 EARS2Q5JPH6 523 aaKnown RBP14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 MBOAT7Q96N66 472 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 UIMC1Q96RL1 719 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 SDF4Q9BRK5 362 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 KATNAL1Q9BW62 490 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 TUT1Q9H6E5 874 aaKnown RBP14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 SLC9A2Q9UBY0 812 aa14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 COLQQ9Y215 455 aaPredicted RBP14.67□□□□□ -0.06
MTHFD1-208ENST00000554739 CCDC194A0A1B0GVG4 234 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 BTBD18B2RXH4 712 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 MSH4O15457 936 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 TDP2O95551 362 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 CCNE2O96020 404 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 TIMP1P01033 207 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 SUPT20HL2P0C7V6 817 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 BMP8BP34820 402 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 FOSBP53539 338 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 ACTR2P61160 394 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 SETQ01105 290 aaPredicted RBP14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 Q4G0T1 1027 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 UTP14CQ5TAP6 766 aaKnown RBP14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 MOXD1Q6UVY6 613 aa14.66□□□□□ -0.06
MTHFD1-208ENST00000554739 PIK3AP1Q6ZUJ8 805 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms