RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 NAALADL2Q58DX5 795 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
SCFD1-212ENST00000554486 ZDHHC13Q8IUH4 622 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 SHKBP1Q8TBC3 707 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 EZH1Q92800 747 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-212ENST00000554486 NKD1Q969G9 470 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 ISL2Q96A47 359 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 SYT17Q9BSW7 474 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 ATXN3LQ9H3M9 355 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 FBRSQ9HAH7 460 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 POLLQ9UGP5 575 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 DBNLQ9UJU6 430 aaKnown RBP7.67□□□□□ -1.18
SCFD1-212ENST00000554486 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 XDHP47989 1333 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-212ENST00000554486 PRAMEF27A3QJZ7 478 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 WDR64B1ANS9 1081 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 FANCGO15287 622 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 DYNC1LI2O43237 492 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-212ENST00000554486 DNAJA2O60884 412 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 UFL1O94874 794 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 TGFB1P01137 390 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
SCFD1-212ENST00000554486 SLC5A1P13866 664 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 KLRK1P26718 216 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 GRK4P32298 578 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 SOX9P48436 509 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 SEZ6L2Q6UXD5 910 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 SLC43A3Q8NBI5 491 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 TBC1D16Q8TBP0 767 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 LPIN2Q92539 896 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 MFSD14AQ96MC6 490 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 NEUROD6Q96NK8 337 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 GPR101Q96P66 508 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-212ENST00000554486 SEMA6CQ9H3T2 930 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 EHMT1Q9H9B1 1298 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 STAP2Q9UGK3 403 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 LEMD3Q9Y2U8 911 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 ZNF804BA4D1E1 1349 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 CHD4Q14839 1912 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 AKAP11Q9UKA4 1901 aa7.66□□□□□ -1.18
SCFD1-212ENST00000554486 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 ATE1O95260 518 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 BPNT1O95861 308 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 IFIT1P09914 478 aaKnown RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 ATF4P18848 351 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 PHKA1P46020 1223 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 KCNJ4P48050 445 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 RGS3P49796 1198 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 PDE1AP54750 535 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 NKG7Q16617 165 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 CCDC93Q567U6 631 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 TSHZ3Q63HK5 1081 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 DPP8Q6V1X1 898 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 C15orf52Q6ZUT6 534 aaKnown RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 FAM84BQ96KN1 310 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 RTFDC1Q9BY42 306 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-212ENST00000554486 EFR3BQ9Y2G0 817 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 PCDHB14Q9Y5E9 798 aa7.65□□□□□ -1.18
SCFD1-212ENST00000554486 AOX1Q06278 1338 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 NFICP08651 508 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 MX1P20591 662 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 GYG1P46976 350 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 CD97P48960 835 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 SLBPQ14493 270 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCFD1-212ENST00000554486 CPSF6Q16630 551 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCFD1-212ENST00000554486 SOGA3Q5TF21 947 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 REXO1Q8N1G1 1221 aaKnown RBP7.64□□□□□ -1.19
SCFD1-212ENST00000554486 FBXL6Q8N531 539 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 PI4K2BQ8TCG2 481 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 ACSF2Q96CM8 615 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-212ENST00000554486 GMLQ99445 158 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 OSBPL1AQ9BXW6 950 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 TMX4Q9H1E5 349 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-212ENST00000554486 ECHDC1Q9NTX5 307 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 MYH13Q9UKX3 1938 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 CCDC88AQ3V6T2 1871 aa7.64□□□□□ -1.19
SCFD1-212ENST00000554486 MED23Q9ULK4 1368 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 TTC41PQ6P2S7 1318 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 PRR19A6NJB7 356 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 RBAK-RBAKDNI3L0D1 243 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 HTR3BO95264 441 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.196e-10■□□□□ 9.8
SCFD1-212ENST00000554486 ATP5JP18859 108 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 RAB6AP20340 208 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 TMEM201Q5SNT2 666 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 GORABQ5T7V8 394 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 SMYD4Q8IYR2 804 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-212ENST00000554486 RTKN2Q8IZC4 609 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 TBC1D32Q96NH3 1257 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 PSMG3-AS1Q96PY0 264 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 PSMD1Q99460 953 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 C1GALT1Q9NS00 363 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 TJP2Q9UDY2 1190 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 PPT2Q9UMR5 302 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 MYO5AQ9Y4I1 1855 aaKnown RBP7.63□□□□□ -1.19
SCFD1-212ENST00000554486 COL4A5P29400 1685 aa7.63□□□□□ -1.19
SCFD1-212ENST00000554486 SCN9AQ15858 1988 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms