RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 PTK7Q13308 1070 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 IKBKEQ14164 716 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 SGMS1Q86VZ5 419 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 EMID1Q96A84 441 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 UBAC1Q9BSL1 405 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 KIAA1217Q5T5P2 1943 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 GJB5O95377 273 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 F2P00734 622 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 WTAPQ15007 396 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 ZNF618Q5T7W0 954 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 STAG2Q8N3U4 1231 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 WNT8BQ93098 351 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 FAM122AQ96E09 287 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 RAD9AQ99638 391 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 AMNQ9BXJ7 453 aa16.14■□□□□ 0.17
SPTLC2-202ENST00000554365 HAS3O00219 553 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 OPLAHO14841 1288 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 EFCAB14O75071 495 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 PLA2G5P39877 138 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 MCM2P49736 904 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 HSD17B4P51659 736 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 ST3GAL1Q11201 340 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 ME3Q16798 604 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 IFIT1BQ5T764 474 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 SPATA33Q96N06 139 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 TGS1Q96RS0 853 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 EPHX3Q9H6B9 360 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 SUGCTQ9HAC7 445 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 LIMCH1Q9UPQ0 1083 aa16.13■□□□□ 0.17
SPTLC2-202ENST00000554365 LINC01553A4QN01 128 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 KLRF2D3W0D1 207 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 GGPS1O95749 300 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 HOXA13P31271 388 aaPredicted RBP16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 HSDL1Q3SXM5 330 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 TRAF7Q6Q0C0 670 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 APOA5Q6Q788 366 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 TMX3Q96JJ7 454 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 PDCD2LQ9BRP1 358 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 LMCD1Q9NZU5 365 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 NID2Q14112 1375 aa16.12■□□□□ 0.17
SPTLC2-202ENST00000554365 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 ERICH2A1L162 156 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 PPP1R11O60927 126 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 PPFIA4O75335 1185 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 LGR5O75473 907 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 RGS20O76081 388 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 PDIA3P30101 505 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 ERVK-21P61565 698 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 FGD1P98174 961 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 HIC1Q14526 733 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 MBTPS1Q14703 1052 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 CELF3Q5SZQ8 465 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 KCNV1Q6PIU1 500 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.11■□□□□ 0.176e-11■■■■■ 35.6
SPTLC2-202ENST00000554365 HOMER1Q86YM7 354 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 TMTC2Q8N394 836 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 ZNF274Q96GC6 653 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 PCDHA1Q9Y5I3 950 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 MYH6P13533 1939 aa16.11■□□□□ 0.17
SPTLC2-202ENST00000554365 NCOR1O75376 2440 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 ZBTB5O15062 677 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 AMHP03971 560 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 THPOP40225 353 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 TROAPQ12815 778 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 PGM5Q15124 567 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 RAB11FIP4Q86YS3 637 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 ZNF654Q8IZM8 581 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 MYOCDQ8IZQ8 938 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 IL31RAQ8NI17 732 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 LRFN3Q9BTN0 628 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
SPTLC2-202ENST00000554365 C17orf102A2RUQ5 167 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 RSPH10B2B2RC85 870 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 PFKFB2O60825 505 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 RSPH10BP0C881 870 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 HOXD8P13378 290 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 UBA1P22314 1058 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 CCND2P30279 289 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 SP2Q02086 613 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 GHRHRQ02643 423 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 CUL4AQ13619 759 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 TMEM31Q5JXX7 168 aa16.09■□□□□ 0.17
SPTLC2-202ENST00000554365 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms