RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CTU1Q7Z7A3 348 aaKnown RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 USP48Q86UV5 1035 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 RELL1Q8IUW5 271 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 FBXL6Q8N531 539 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 SHKBP1Q8TBC3 707 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 RUFY2Q8WXA3 655 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 DPF2Q92785 391 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 TMX3Q96JJ7 454 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 ZSCAN31Q96LW9 406 aaPredicted RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 DBNDD2Q9BQY9 259 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 PIDD1Q9HB75 910 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 GBA2Q9HCG7 927 aaPredicted RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CNOT7Q9UIV1 285 aaKnown RBP6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CCDC171Q6TFL3 1326 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 SALL3Q9BXA9 1300 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 CASP8AP2Q9UKL3 1982 aa6.95□□□□□ -1.3
VPS33B-203ENST00000554264 UQCRHLA0A096LP55 91 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 FAM170BA6NMN3 283 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 FAM155AB1AL88 458 aaPredicted RBP6.94□□□□□ -1.3
VPS33B-203ENST00000554264 WDR64B1ANS9 1081 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 RAD17O75943 681 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 UQCRHP07919 91 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 RPS12P25398 132 aaKnown RBP6.94□□□□□ -1.3
VPS33B-203ENST00000554264 UBE2HP62256 183 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 ATP8B2P98198 1209 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 KIF23Q02241 960 aaPredicted RBP6.94□□□□□ -1.3
VPS33B-203ENST00000554264 DCTN1Q14203 1278 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 MAP7Q14244 749 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 PKN2Q16513 984 aaKnown RBP6.94□□□□□ -1.3
VPS33B-203ENST00000554264 SLC10A5Q5PT55 438 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 TTLL7Q6ZT98 887 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 KRT26Q7Z3Y9 468 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 SLC51AQ86UW1 340 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 GPT2Q8TD30 523 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 PIBF1Q8WXW3 757 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 ELMO3Q96BJ8 720 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 DCPSQ96C86 337 aaKnown RBP6.94□□□□□ -1.3
VPS33B-203ENST00000554264 UTP14AQ9BVJ6 771 aaKnown RBP6.94□□□□□ -1.3
VPS33B-203ENST00000554264 YIPF2Q9BWQ6 316 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 DIAPH3Q9NSV4 1193 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 RNF186Q9NXI6 227 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 GGT7Q9UJ14 662 aa6.94□□□□□ -1.3
VPS33B-203ENST00000554264 LAMB4A4D0S4 1761 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 SYCE3A1L190 88 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 PRAMEF27A3QJZ7 478 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 RBAK-RBAKDNI3L0D1 243 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 HIP1O00291 1037 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 FANCGO15287 622 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 MED26O95402 600 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 TGFB1P01137 390 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 MYL6BP14649 208 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 HSPA4P34932 840 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 EIF4A1P60842 406 aaKnown RBP6.93□□□□□ -1.3
VPS33B-203ENST00000554264 CDK5R2Q13319 367 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 GRAPQ13588 217 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 DHX8Q14562 1220 aaKnown RBP6.93□□□□□ -1.3
VPS33B-203ENST00000554264 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 DDX46Q7L014 1031 aaKnown RBP6.93□□□□□ -1.3
VPS33B-203ENST00000554264 ZAR1Q86SH2 424 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 MYRIPQ8NFW9 859 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 FBXO27Q8NI29 283 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 GRAPLQ8TC17 118 aaPredicted RBP6.93□□□□□ -1.3
VPS33B-203ENST00000554264 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 TM6SF1Q9BZW5 370 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 FBRSQ9HAH7 460 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 ADAMTS1Q9UHI8 967 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 PCOLCE2Q9UKZ9 415 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 ZDHHC9Q9Y397 364 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 SNCAIPQ9Y6H5 919 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 TTC41PQ6P2S7 1318 aa6.93□□□□□ -1.3
VPS33B-203ENST00000554264 PDE4DIPQ5VU43 2346 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 YDJCA8MPS7 323 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 CILPO75339 1184 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 PDCP20941 246 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 CHMLP26374 656 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 SYCP1Q15431 976 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 HSP90AB3PQ58FF7 597 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 UTP14CQ5TAP6 766 aaKnown RBP6.92□□□□□ -1.3
VPS33B-203ENST00000554264 HS2ST1Q7LGA3 356 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 HDXQ7Z353 690 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
VPS33B-203ENST00000554264 TICAM2Q86XR7 235 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 GOLM1Q8NBJ4 401 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 MEIS3Q99687 375 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 MIS18AQ9NYP9 233 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 R3HCC1Q9Y3T6 440 aaKnown RBP6.92□□□□□ -1.3
VPS33B-203ENST00000554264 RAD50Q92878 1312 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 RPAP1Q9BWH6 1393 aaPredicted RBP6.92□□□□□ -1.3
VPS33B-203ENST00000554264 NUP98P52948 1817 aa6.92□□□□□ -1.3
VPS33B-203ENST00000554264 SHTN1A0MZ66 631 aa6.91□□□□□ -1.3
VPS33B-203ENST00000554264 ELL2O00472 640 aaPredicted RBP6.91□□□□□ -1.3
VPS33B-203ENST00000554264 PSMD14O00487 310 aa6.91□□□□□ -1.3
VPS33B-203ENST00000554264 GSC2O15499 205 aa6.91□□□□□ -1.3
VPS33B-203ENST00000554264 GREM1O60565 184 aa6.91□□□□□ -1.3
VPS33B-203ENST00000554264 LEFTY1O75610 366 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms